RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 MYCBPAPQ8TBZ2 947 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 B3GALT6Q96L58 329 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 SPAG5Q96R06 1193 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 HNRNPABQ99729 332 aaKnown RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 CLSTN3Q9BQT9 956 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 DPEP3Q9H4B8 488 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 ACP6Q9NPH0 428 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 DDX43Q9NXZ2 648 aaKnown RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 MSRAQ9UJ68 235 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 PCDHB4Q9Y5E5 795 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 REV3LO60673 3130 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 PTPRDP23468 1912 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 MYO7AQ13402 2215 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SSU72P8A0A1W2PR75 194 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 EPOPA6NHQ4 379 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 H7C4K7 107 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 O00370 1275 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 GRM6O15303 877 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ADAM12O43184 909 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ATP2C2O75185 946 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 GFPT2O94808 682 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ABLIM3O94929 683 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 PAPLNO95428 1278 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SERPING1P05155 500 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 VDRP11473 427 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 CD58P19256 250 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ANXA13P27216 316 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 CDH5P33151 784 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 RPL34P49207 117 aaKnown RBP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ERVFC1P60507 584 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 CDR2Q01850 454 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 GOLGA8FQ08AF8 430 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 GOLGA8DPQ0D2H9 430 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 CCDC173Q0VFZ6 552 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SMARCB1Q12824 385 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 GPR17Q13304 367 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 RAB33AQ14088 237 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 PDE12Q6L8Q7 609 aaKnown RBP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF280DQ6N043 979 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 LILRA6Q6PI73 481 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 LCLAT1Q6UWP7 414 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ACOT1Q86TX2 421 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 NOP9Q86U38 636 aaKnown RBP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 METTL23Q86XA0 190 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF677Q86XU0 584 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 FUKQ8N0W3 1084 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 MRPL43Q8N983 215 aaKnown RBP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SPC24Q8NBT2 197 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 B3GALNT2Q8NCR0 500 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 OR6B3Q8NGW1 331 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF606Q8WXB4 792 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 TIFAQ96CG3 184 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 TNIP3Q96KP6 325 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SYT15Q9BQS2 421 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 B3GNT5Q9BYG0 378 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 LMAN2LQ9H0V9 348 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 LHX5Q9H2C1 402 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SNX25Q9H3E2 840 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 NGRNQ9NPE2 291 aaKnown RBP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 TMLHEQ9NVH6 421 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ARHGAP20Q9P2F6 1191 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 HSFX1Q9UBD0 423 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 MAFFQ9ULX9 164 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SSX2IPQ9Y2D8 614 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 BZW2Q9Y6E2 419 aaKnown RBP9.7□□□□□ -0.86
SCARB2-225ENST00000640900 ATG2AQ2TAZ0 1938 aa9.7□□□□□ -0.86
SCARB2-225ENST00000640900 SZT2Q5T011 3432 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 MYBPHLA2RUH7 354 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 C2orf71A6NGG8 1288 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 A8MXQ7 604 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 LCA5LO95447 670 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 TPM1P09493 284 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 PDGFRBP09619 1106 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 CCDC172P0C7W6 258 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 KRT5P13647 590 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 POU3F3P20264 500 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-225ENST00000640900 FMO1Q01740 532 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 PTK2Q05397 1052 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 STILQ15468 1287 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 PSMD5Q16401 504 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 ASIC2Q16515 512 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 CCDC142Q17RM4 750 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 CFAP221Q4G0U5 840 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 CTXN3Q4LDR2 81 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 PPP2R2DQ66LE6 453 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 PRSS55Q6UWB4 352 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-225ENST00000640900 CCDC186Q7Z3E2 898 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF571Q7Z3V5 609 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-225ENST00000640900 LRRC8AQ8IWT6 810 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 THEM5Q8N1Q8 247 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 WDTC1Q8N5D0 677 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 C12orf29Q8N999 325 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 FBXO22Q8NEZ5 403 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 POF1BQ8WVV4 589 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 RIN2Q8WYP3 895 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-225ENST00000640900 FUBP3Q96I24 572 aaKnown RBP eCLIP9.69□□□□□ -0.862e-19■■■■■ 47.5
SCARB2-225ENST00000640900 TMEM209Q96SK2 561 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms