RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 LRRC8EQ6NSJ5 796 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ARHGEF19Q8IW93 802 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 LRRN4CLQ8ND94 238 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ADCY4Q8NFM4 1077 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TSPAN14Q8NG11 270 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 SH3KBP1Q96B97 665 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 NSMCE3Q96MG7 304 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 LMCD1Q9NZU5 365 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 MFN2O95140 757 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 YWHAGP61981 247 aaKnown RBP eCLIP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 DPYDQ12882 1025 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TJAP1Q5JTD0 557 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 CATSPER3Q86XQ3 398 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ENKURQ8TC29 256 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 BIRC8Q96P09 236 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ANO3Q9BYT9 981 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 UBE2OQ9C0C9 1292 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 C20orf96Q9NUD7 363 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 MINPP1Q9UNW1 487 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 SGK1O00141 431 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 MAP3K13O43283 966 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ABCB1P08183 1280 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 NCF2P19878 526 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 NFKBIAP25963 317 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 MFAP3P55082 362 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 DYNLT1P63172 113 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF844Q08AG5 666 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 COASYQ13057 564 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 DMP1Q13316 513 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 DPYSQ14117 519 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 HP1BP3Q5SSJ5 553 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 GDPD5Q8WTR4 605 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 SMYD3Q9H7B4 428 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 MANSC1Q9H8J5 431 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ADAM22Q9P0K1 906 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 UBA2Q9UBT2 640 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 RPS6KL1Q9Y6S9 549 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 LMTK3Q96Q04 1460 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CLRN2A0PK11 232 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 EIF4E1BA6NMX2 242 aaKnown RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 H7C0S8 307 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CACNB3P54284 484 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ABCE1P61221 599 aaKnown RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 EDRF1Q3B7T1 1238 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF829Q3KNS6 432 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 DHDDSQ86SQ9 333 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ENDOVQ8N8Q3 282 aaKnown RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 RNASE11Q8TAA1 199 aaKnown RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 GLG1Q92896 1179 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 BTBD6Q96KE9 485 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 FRMD8P1Q9BZ68 369 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 EPB41L4AQ9HCS5 686 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 C12orf4Q9NQ89 552 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 TAS2R1Q9NYW7 299 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 IL20Q9NYY1 176 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 TMEM9Q9P0T7 183 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF221Q9UK13 617 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 SLC8A2Q9UPR5 921 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CDY2AQ9Y6F7 541 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CDY1Q9Y6F8 540 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ARAP3Q8WWN8 1544 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 FAM196BA6NMK8 535 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 F8W810 466 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CYP2C9P11712 490 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 PABPC1P11940 636 aaKnown RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 NCKAP1LP55160 1127 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CENPCQ03188 943 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 EFTUD2Q15029 972 aaKnown RBP eCLIP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CYP4A22Q5TCH4 519 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 TMEM126BQ8IUX1 230 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ATL1Q8WXF7 558 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ARHGEF1Q92888 912 aaKnown RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CEP95Q96GE4 821 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CCDC17Q96LX7 622 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 DBNDD1Q9H9R9 158 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 SH3GLB2Q9NR46 395 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 H0YIN7 160 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 KLK7P49862 253 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF544Q6NX49 715 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 POTEGQ6S5H5 508 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 C6orf89Q6UWU4 347 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CLVS1Q8IUQ0 354 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-227ENST00000640648 RTKN2Q8IZC4 609 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CCDC33Q8N5R6 958 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 FNDC8Q8TC99 324 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 TRIM9Q9C026 710 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 CCDC90BQ9GZT6 254 aa8.61□□□□□ -1.03
NECAP1-227ENST00000640648 PNMA6FA0A0J9YX94 578 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 FADS2P1A8MWK0 482 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 TTC34A8MYJ7 566 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 RAD51BO15315 384 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 PJA2O43164 708 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 PHGDHO43175 533 aaKnown RBP8.6□□□□□ -1.03
NECAP1-227ENST00000640648 PSTPIP1O43586 416 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 TSPAN1O60635 241 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 F8A1P23610 371 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 PIK3CAP42336 1068 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 GALK1P51570 392 aa8.6□□□□□ -1.03
NECAP1-227ENST00000640648 SLC12A2P55011 1212 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms