RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CPSF2Q9P2I0 782 aaKnown RBP18.37■□□□□ 0.53
SCARB2-223ENST00000640640 SNRPAP09012 282 aaKnown RBP18.37■□□□□ 0.53
SCARB2-223ENST00000640640 SERPINB9P50453 376 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 ANKRD20A4Q4UJ75 823 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 ANKRD20A8PQ5CZ79 823 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 ANKRD20A2Q5SQ80 823 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 ANKRD20A1Q5TYW2 823 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 C1orf146Q5VVC0 180 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 EMC1Q8N766 993 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 SPDL1Q96EA4 605 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 AP3B1O00203 1094 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 MAP3K6O95382 1288 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 NCAM1P13591 858 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 PRKCIP41743 596 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 KDM7AQ6ZMT4 941 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 HSD17B14Q9BPX1 270 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 FRMD8Q9BZ67 464 aaPredicted RBP18.37■□□□□ 0.53
SCARB2-223ENST00000640640 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 VEPH1Q14D04 833 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 PDZD8Q8NEN9 1154 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 AGR3Q8TD06 166 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 RMDN1Q96DB5 314 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 FAM161BQ96MY7 647 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 PEX19P40855 299 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
SCARB2-223ENST00000640640 ACTN3Q08043 901 aaPredicted RBP18.36■□□□□ 0.53
SCARB2-223ENST00000640640 NSUN2Q08J23 767 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCARB2-223ENST00000640640 KCNMA1Q12791 1236 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 NT5DC3Q86UY8 548 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 ATPAF2Q8N5M1 289 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 CAVIN3Q969G5 261 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 CPB2Q96IY4 423 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCARB2-223ENST00000640640 ANKRD63C9JTQ0 380 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 NFKBIAP25963 317 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 OTUD4Q01804 1114 aaKnown RBP18.36■□□□□ 0.53
SCARB2-223ENST00000640640 CCDC60Q8IWA6 550 aaPredicted RBP18.36■□□□□ 0.53
SCARB2-223ENST00000640640 ZBTB45Q96K62 511 aaPredicted RBP18.36■□□□□ 0.53
SCARB2-223ENST00000640640 NPHS2Q9NP85 383 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 WHRNQ9P202 907 aa18.36■□□□□ 0.53
SCARB2-223ENST00000640640 UBA6A0AVT1 1052 aaPredicted RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 ITGB5P18084 799 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 FAXCQ5TGI0 409 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 EPS8L3Q8TE67 593 aaKnown RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 KRT35Q92764 455 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 PABPC5Q96DU9 382 aaKnown RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 CYP3A43Q9HB55 503 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 SARS2Q9NP81 518 aaKnown RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 PCDHGC5Q9Y5F6 944 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 C17orf102A2RUQ5 167 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 SNX2O60749 519 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 B3GAT3O94766 335 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 PCMTD2Q9NV79 361 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 SCOCQ9UIL1 159 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 KCNH4Q9UQ05 1017 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 SPATA31C1P0DKV0 1188 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 ACO1P21399 889 aaKnown RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 RAP1GAPP47736 663 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 MORF4L2Q15014 288 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 CCNG2Q16589 344 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 FRA10AC1Q70Z53 315 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 ASAP3Q8TDY4 903 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 TMEM176AQ96HP8 235 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 ASCC2Q9H1I8 757 aaPredicted RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 ASTN1O14525 1302 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 UGP2Q16851 508 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 RNF219Q5W0B1 726 aaPredicted RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 C4orf22Q6V702 233 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 GPC2Q8N158 579 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 TRAPPC12Q8WVT3 735 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 KAT5Q92993 513 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 CNPY3Q9BT09 278 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 CDC42EP4Q9H3Q1 356 aaKnown RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 CACYBPQ9HB71 228 aaKnown RBP18.35■□□□□ 0.53
SCARB2-223ENST00000640640 KLC4Q9NSK0 619 aa18.35■□□□□ 0.53
SCARB2-223ENST00000640640 TBC1D12O60347 775 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 EPHB2P29323 1055 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 NOP9Q86U38 636 aaKnown RBP18.34■□□□□ 0.53
SCARB2-223ENST00000640640 IRF2BP1Q8IU81 584 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 CNPY4Q8N129 248 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 REPS2Q8NFH8 660 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 DDIT4Q9NX09 232 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 UBIAD1Q9Y5Z9 338 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 M0QYT0 321 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 GNGT2O14610 69 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 STX3Q13277 289 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 TMTC4Q5T4D3 741 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 LVRNQ6Q4G3 990 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 TRPM8Q7Z2W7 1104 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 BRSK2Q8IWQ3 736 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 PARP9Q8IXQ6 854 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 DDX27Q96GQ7 796 aaKnown RBP18.34■□□□□ 0.53
SCARB2-223ENST00000640640 MYCBPQ99417 103 aaPredicted RBP18.34■□□□□ 0.53
SCARB2-223ENST00000640640 CYP4F11Q9HBI6 524 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 TRIM66O15016 1216 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 POLBP06746 335 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 HSPA8P11142 646 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms