RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 C11orf74Q86VG3 221 aa14.87□□□□□ -0.03
HLA-C-210ENST00000640219 RASSF8Q8NHQ8 419 aa14.87□□□□□ -0.03
HLA-C-210ENST00000640219 SPATA32Q96LK8 384 aa14.87□□□□□ -0.03
HLA-C-210ENST00000640219 DNAJC25Q9H1X3 360 aa14.87□□□□□ -0.03
HLA-C-210ENST00000640219 GKN1Q9NS71 199 aa14.87□□□□□ -0.03
HLA-C-210ENST00000640219 KIF26AQ9ULI4 1882 aaPredicted RBP14.86□□□□□ -0.03
HLA-C-210ENST00000640219 A0A087X0B3 334 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 PRAMEF12O95522 483 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 UBA7P41226 1012 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 ALDH1A3P47895 512 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 LMAN2Q12907 356 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 RUNX3Q13761 415 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 USP39Q53GS9 565 aaKnown RBP14.86□□□□□ -0.03
HLA-C-210ENST00000640219 ATL3Q6DD88 541 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 GAREM2Q75VX8 874 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 SYT13Q7L8C5 426 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 GPBP1Q86WP2 473 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 TMEM130Q8N3G9 435 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 CHCHD4Q8N4Q1 142 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 CEP120Q8N960 986 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 SYT2Q8N9I0 419 aaPredicted RBP14.86□□□□□ -0.03
HLA-C-210ENST00000640219 APPL2Q8NEU8 664 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 PIGKQ92643 395 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 SUSD3Q96L08 255 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 BBC3Q96PG8 261 aaPredicted RBP14.86□□□□□ -0.03
HLA-C-210ENST00000640219 NUP62CLQ9H1M0 184 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 SLC38A7Q9NVC3 462 aa14.86□□□□□ -0.03
HLA-C-210ENST00000640219 SMG1Q96Q15 3661 aaKnown RBP14.86□□□□□ -0.03
HLA-C-210ENST00000640219 NUP205Q92621 2012 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 GOLGA6L6A8MZA4 724 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 DRD1P21728 446 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 GABRR2P28476 465 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 LONP1P36776 959 aaKnown RBP14.85□□□□□ -0.03
HLA-C-210ENST00000640219 YARSP54577 528 aaKnown RBP14.85□□□□□ -0.03
HLA-C-210ENST00000640219 SCAPQ12770 1279 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 DMC1Q14565 340 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 BEST2Q8NFU1 509 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 RPLP0P6Q8NHW5 317 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 DDX12PQ92771 950 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 KIFAP3Q92845 792 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 IFT74Q96LB3 600 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 ZNF396Q96N95 335 aaPredicted RBP14.85□□□□□ -0.03
HLA-C-210ENST00000640219 PGLYRP2Q96PD5 576 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 REEP2Q9BRK0 252 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 FBRSL1Q9HCM7 1045 aaKnown RBP14.85□□□□□ -0.03
HLA-C-210ENST00000640219 TOPORSQ9NS56 1045 aaPredicted RBP14.85□□□□□ -0.03
HLA-C-210ENST00000640219 EVLQ9UI08 416 aaPredicted RBP14.85□□□□□ -0.03
HLA-C-210ENST00000640219 CITO14578 2027 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 ATG2BQ96BY7 2078 aa14.85□□□□□ -0.03
HLA-C-210ENST00000640219 LAMA5O15230 3695 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 VNN2O95498 520 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 FGF19O95750 216 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 BMP15O95972 392 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 HARSP12081 509 aaKnown RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 WEE1P30291 646 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 RPL9P32969 192 aaKnown RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 MAPK8P45983 427 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 DHPSP49366 369 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 GALK1P51570 392 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 OSTNP61366 133 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 AMPD2Q01433 879 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 DUSP4Q13115 394 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 FBXO43Q4G163 708 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 TRIM61Q5EBN2 209 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 XKR4Q5GH76 650 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 ATF7IP2Q5U623 682 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 ALKAL1Q6UXT8 129 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 APBB1IPQ7Z5R6 666 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 DNAJB7Q7Z6W7 309 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 PIP4P1Q86T03 277 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 RAD54LQ92698 747 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 CHFRQ96EP1 664 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 CALML4Q96GE6 196 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 ZBTB45Q96K62 511 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 CCDC94Q9BW85 323 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 TARS2Q9BW92 718 aaKnown RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 NUSAP1Q9BXS6 441 aaKnown RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 CRISPLD1Q9H336 500 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 EBF3Q9H4W6 596 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 TASP1Q9H6P5 420 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 HPS4Q9NQG7 708 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 KMT5AQ9NQR1 393 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 ASB3Q9Y575 518 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 SRPRBQ9Y5M8 271 aaKnown RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 STK24Q9Y6E0 443 aa14.84□□□□□ -0.03
HLA-C-210ENST00000640219 HELZ2Q9BYK8 2649 aaKnown RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 NUP210Q8TEM1 1887 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 ASCC3Q8N3C0 2202 aaKnown RBP14.84□□□□□ -0.03
HLA-C-210ENST00000640219 OTOL1A6NHN0 477 aaPredicted RBP14.83□□□□□ -0.04
HLA-C-210ENST00000640219 OR4Q2P0C623 313 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 BCKDHBP21953 392 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 GUCY2CP25092 1073 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 SEMA3BQ13214 749 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 DMP1Q13316 513 aaPredicted RBP14.83□□□□□ -0.04
HLA-C-210ENST00000640219 SLC39A14Q15043 492 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 PPP2R5AQ15172 486 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 STK38Q15208 465 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 SEZ6Q53EL9 994 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 TRIM68Q6AZZ1 485 aa14.83□□□□□ -0.04
HLA-C-210ENST00000640219 PDILTQ8N807 584 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms