RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 DGKIO75912 1065 aa15.34■□□□□ 0.05
HNRNPU-226ENST00000640218 XRRA1Q6P2D8 792 aa15.34■□□□□ 0.05
HNRNPU-226ENST00000640218 PCYOX1LQ8NBM8 494 aa15.34■□□□□ 0.05
HNRNPU-226ENST00000640218 XPO6Q96QU8 1125 aaKnown RBP15.34■□□□□ 0.05
HNRNPU-226ENST00000640218 C17orf80Q9BSJ5 609 aa15.34■□□□□ 0.05
HNRNPU-226ENST00000640218 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 C17orf102A2RUQ5 167 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 KLRK1P26718 216 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 COILP38432 576 aaPredicted RBP15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 CUL2Q13617 745 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 TDRD10Q5VZ19 366 aaKnown RBP15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 PPIL6Q8IXY8 311 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 CYGBQ8WWM9 190 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 FAM162AQ96A26 154 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 SLC24A3Q9HC58 644 aa15.33■□□□□ 0.05
HNRNPU-226ENST00000640218 RHOBTB1O94844 696 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 ICE2Q659A1 982 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 THAP2Q9H0W7 228 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 WDCPQ9H6R7 721 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 ZNF556Q9HAH1 456 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 HPS4Q9NQG7 708 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 GRID1Q9ULK0 1009 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 TRIM17Q9Y577 477 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 EPHB2P29323 1055 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 PAN2Q504Q3 1202 aaKnown RBP15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 MADDQ8WXG6 1647 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 M0QYT0 321 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 EIF3HO15372 352 aaKnown RBP eCLIP15.33■□□□□ 0.049e-9■■□□□ 12.4
HNRNPU-226ENST00000640218 ICAM1P05362 532 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 FCGRTP55899 365 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 PTK6Q13882 451 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 ERP27Q96DN0 273 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 IL17RAQ96F46 866 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 SEC16BQ96JE7 1060 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 ZIM3Q96PE6 472 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 HSPA1AP0DMV8 641 aaKnown RBP15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 HSPA1BP0DMV9 641 aaKnown RBP15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 PNPLA4P41247 253 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 GPRASP2Q96D09 838 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 PPCSQ9HAB8 311 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 PSD3Q9NYI0 1048 aa15.33■□□□□ 0.04
HNRNPU-226ENST00000640218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.33■□□□□ 0.046e-10■■□□□ 13.8
HNRNPU-226ENST00000640218 KLHL2O95198 593 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 ODC1P11926 461 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 THPOP40225 353 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 CHI3L2Q15782 390 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 PRR23CQ6ZRP0 262 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 PRUNE1Q86TP1 453 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 CINPQ9BW66 212 aaPredicted RBP15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 FOXP3Q9BZS1 431 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 GPRC5CQ9NQ84 441 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 H0Y626 953 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 PMPCBO75439 489 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 TRIM16O95361 564 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 EME1Q96AY2 570 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 FAXCQ5TGI0 409 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 NAPEPLDQ6IQ20 393 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 TBC1D4O60343 1298 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 CYP11B2P19099 503 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 C11orf96Q7Z7L8 435 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 ROPN1BQ9BZX4 212 aaPredicted RBP15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 BRD8Q9H0E9 1235 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 ROPN1Q9HAT0 212 aaPredicted RBP15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 CFAP99D6REC4 459 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 SGPL1O95470 568 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 RPS12P25398 132 aaKnown RBP15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 SOAT1P35610 550 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 PRPF39Q86UA1 669 aaKnown RBP15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 RDM1Q8NG50 284 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 MANSC1Q9H8J5 431 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 DDIT4Q9NX09 232 aa15.32■□□□□ 0.04
HNRNPU-226ENST00000640218 PLEKP08567 350 aaPredicted RBP15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 CTCFP49711 727 aaPredicted RBP15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 LAYNQ6UX15 382 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 KIRREL3Q8IZU9 778 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 CMTM5Q96DZ9 223 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 ISCUQ9H1K1 167 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 MTO1Q9Y2Z2 717 aaKnown RBP15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 CLASP2O75122 1294 aaKnown RBP15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 TPCN2Q8NHX9 752 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 SEPT8Q92599 483 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 SYN2Q92777 582 aaPredicted RBP15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 ARHGEF9O43307 516 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 CDH2P19022 906 aaPredicted RBP15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 PTPN7P35236 360 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 SLC29A2Q14542 456 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 SDE2Q6IQ49 451 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 AGGF1Q8N302 714 aaeCLIP15.31■□□□□ 0.041e-9■■■□□ 16.9
HNRNPU-226ENST00000640218 GALNT4Q8N4A0 578 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 hCG_2014768A0A024R1R8 64 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 LRG1P02750 347 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 MTFR1Q15390 333 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 RNF180Q86T96 592 aa15.31■□□□□ 0.04
HNRNPU-226ENST00000640218 KCTD17Q8N5Z5 321 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms