RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PTPRN2Q92932 1015 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 SPATA16Q9BXB7 569 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 UBXN6Q9BZV1 441 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
SCN1B-208ENST00000640135 ARHGEF38Q9NXL2 777 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 SLC25A13Q9UJS0 675 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 MGEA5O60502 916 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 TLR2O60603 784 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCN1B-208ENST00000640135 AARS2Q5JTZ9 985 aaKnown RBP11.52□□□□□ -0.57
SCN1B-208ENST00000640135 TEDDM1Q5T9Z0 273 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 ANGPTL8Q6UXH0 198 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 NUDCD3Q8IVD9 361 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 METTL5Q9NRN9 209 aaKnown RBP11.52□□□□□ -0.57
SCN1B-208ENST00000640135 L3MBTL1Q9Y468 752 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 NFASCO94856 1347 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 ZNF263O14978 683 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 POLBP06746 335 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 SPRP35270 261 aaPredicted RBP11.52□□□□□ -0.57
SCN1B-208ENST00000640135 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
SCN1B-208ENST00000640135 ARID5BQ14865 1188 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 TTLL9Q3SXZ7 439 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 TMEM176AQ96HP8 235 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 PI4K2AQ9BTU6 479 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 IL25Q9H293 177 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 PLAGL2Q9UPG8 496 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 NCK2O43639 380 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 LGALS2P05162 132 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CELF3Q5SZQ8 465 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ACOT1Q86TX2 421 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 TMEM86AQ8N2M4 240 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 C1orf131Q8NDD1 294 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ACTR5Q9H9F9 607 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 AGPAT5Q9NUQ2 364 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ZC3H7BQ9UGR2 993 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ALG6Q9Y672 507 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 TTLL13PA6NNM8 815 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CHUKO15111 745 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CST8O60676 142 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 EFCAB14O75071 495 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 GHRP10912 638 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 GFAPP14136 432 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ARMC6Q6NXE6 501 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 UROC1Q96N76 676 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CBWD1Q9BRT8 395 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CARD9Q9H257 536 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CYP39A1Q9NYL5 469 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 MSRAQ9UJ68 235 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 HPSEQ9Y251 543 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CAMTA1Q9Y6Y1 1673 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 GRAP2O75791 330 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ASS1P00966 412 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ZBTB48P10074 688 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 ZNF135P52742 658 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 PRMT2P55345 433 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 PTPN11Q06124 597 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 UGT3A1Q6NUS8 523 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 GRAMD1AQ96CP6 724 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 MTBPQ96DY7 904 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 WNK4Q96J92 1243 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 SYT15Q9BQS2 421 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 LATS2Q9NRM7 1088 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 BARX2Q9UMQ3 279 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 AAR2Q9Y312 384 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 SPECC1L-ADORA2AF8WAN1 911 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 NCAM2O15394 837 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 STX7O15400 261 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 BRAFP15056 766 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 COMTP21964 271 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 IFT88Q13099 833 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 PTRHD1Q6GMV3 140 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 TSPAN18Q96SJ8 248 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 CNPY3Q9BT09 278 aa11.51□□□□□ -0.57
SCN1B-208ENST00000640135 AFF4Q9UHB7 1163 aaKnown RBP11.51□□□□□ -0.57
SCN1B-208ENST00000640135 FRMPD4Q14CM0 1322 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 SEC31AO94979 1220 aaKnown RBP11.5□□□□□ -0.57
SCN1B-208ENST00000640135 MMEP08473 750 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 CNTN2Q02246 1040 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 PABPC1LQ4VXU2 614 aaKnown RBP11.5□□□□□ -0.57
SCN1B-208ENST00000640135 BTNL9Q6UXG8 535 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 EFL1Q7Z2Z2 1120 aaKnown RBP11.5□□□□□ -0.57
SCN1B-208ENST00000640135 OOSP2Q86WS3 158 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 ZNF507Q8TCN5 953 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 TFB1MQ8WVM0 346 aaKnown RBP11.5□□□□□ -0.57
SCN1B-208ENST00000640135 LRRC37BQ96QE4 947 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 NAT9Q9BTE0 207 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 ELOVL4Q9GZR5 314 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 GOLPH3Q9H4A6 298 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 INTS13Q9NVM9 706 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 ADCYAP1R1P41586 468 aa11.5□□□□□ -0.57
SCN1B-208ENST00000640135 PTGER2P43116 358 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms