RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SLC12A5Q9H2X9 1139 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 ZNF180Q9UJW8 692 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 SERTAD3Q9UJW9 196 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC7-216ENST00000640058 GRPP07492 148 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 MYBP10242 640 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 WT1P19544 449 aaPredicted RBP6.12□□□□□ -1.43
CCDC7-216ENST00000640058 PCSK6P29122 969 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 CCT8P50990 548 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 RAB27AP51159 221 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 LILRA4P59901 499 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 SP2Q02086 613 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 LONRF3Q496Y0 759 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 ARHGAP40Q5TG30 622 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 TPH2Q8IWU9 490 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 PPP1R35Q8TAP8 253 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 JPH3Q8WXH2 748 aaPredicted RBP6.12□□□□□ -1.43
CCDC7-216ENST00000640058 C1GALT1C1Q96EU7 318 aa6.12□□□□□ -1.43
CCDC7-216ENST00000640058 TYW1Q9NV66 732 aaKnown RBP6.12□□□□□ -1.43
CCDC7-216ENST00000640058 GCOM1H8Y6P7 765 aaPredicted RBP6.11□□□□□ -1.43
CCDC7-216ENST00000640058 AKAP10O43572 662 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 NDUFB7P17568 137 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 DRD4P21917 467 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 RAB1AP62820 205 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 BMPR2Q13873 1038 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 TMEM119Q4V9L6 283 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 MAVSQ7Z434 540 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 ATRIPQ8WXE1 791 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 DDB2Q92466 427 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 ARHGEF3Q9NR81 526 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 CNNM1Q9NRU3 951 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 PADI4Q9UM07 663 aa6.11□□□□□ -1.43
CCDC7-216ENST00000640058 HNRNPCP07910 306 aaKnown RBP eCLIP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 ATXN1LP0C7T5 689 aaKnown RBP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 JUPP14923 745 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 NCLP19338 710 aaKnown RBP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 PXNP49023 591 aaPredicted RBP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 LOXL3P58215 753 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 SRSF4Q08170 494 aaKnown RBP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 IQCB1Q15051 598 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 PLAC9Q5JTB6 97 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 EMC10Q5UCC4 262 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 ZNF551Q7Z340 670 aaPredicted RBP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 DENND1CQ8IV53 801 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 NT5C1BQ96P26 610 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 P2RX7Q99572 595 aaKnown RBP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 PNMA8BQ9ULN7 279 aaPredicted RBP6.1□□□□□ -1.43
CCDC7-216ENST00000640058 PLEKHM1Q9Y4G2 1056 aa6.1□□□□□ -1.43
CCDC7-216ENST00000640058 NXPH3O95157 252 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 ERBB2P04626 1255 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 HSPA6P17066 643 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 HTR1BP28222 390 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 LIPAP38571 399 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 ABCG1P45844 678 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 AMOTQ4VCS5 1084 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 ICE2Q659A1 982 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 FCRLBQ6BAA4 426 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 NMRK2Q9NPI5 230 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 XPR1Q9UBH6 696 aa6.09□□□□□ -1.43
CCDC7-216ENST00000640058 hCG_1984214I3L0E3 225 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 UCP3P55916 312 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 SOX10P56693 466 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 FOXF2Q12947 444 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 FGL2Q14314 439 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 TREML2Q5T2D2 321 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 ZNF618Q5T7W0 954 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 TEDDM1Q5T9Z0 273 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 SFRP4Q6FHJ7 346 aaPredicted RBP6.08□□□□□ -1.44
CCDC7-216ENST00000640058 RGS7BPQ6MZT1 257 aaPredicted RBP6.08□□□□□ -1.44
CCDC7-216ENST00000640058 DAAM2Q86T65 1068 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 COL23A1Q86Y22 540 aaPredicted RBP6.08□□□□□ -1.44
CCDC7-216ENST00000640058 SRRM1Q8IYB3 904 aaKnown RBP6.08□□□□□ -1.44
CCDC7-216ENST00000640058 HASPINQ8TF76 798 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 DPF1Q92782 380 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 MRGPRX1Q96LB2 322 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 NELL2Q99435 816 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 ACO2Q99798 780 aaKnown RBP6.08□□□□□ -1.44
CCDC7-216ENST00000640058 SERTAD4Q9NUC0 356 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 ZIM2Q9NZV7 527 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 SH3BP4Q9P0V3 963 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 GABBR1Q9UBS5 961 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 SERGEFQ9UGK8 458 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 SSX2IPQ9Y2D8 614 aa6.08□□□□□ -1.44
CCDC7-216ENST00000640058 MRPS17Q9Y2R5 130 aaKnown RBP6.08□□□□□ -1.44
CCDC7-216ENST00000640058 AOX1Q06278 1338 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 E2F8A0AVK6 867 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 WIPF3A6NGB9 483 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 SLC16A3O15427 465 aaKnown RBP6.07□□□□□ -1.44
CCDC7-216ENST00000640058 UBXN7O94888 489 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 CDK4P11802 303 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 ALDH9A1P49189 494 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 DTX2Q86UW9 622 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 RAVER1Q8IY67 606 aaKnown RBP6.07□□□□□ -1.44
CCDC7-216ENST00000640058 ZBTB34Q8NCN2 500 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 ATG4AQ8WYN0 398 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 PTDSS2Q9BVG9 487 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 ANLNQ9NQW6 1124 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 NDRG4Q9ULP0 352 aaKnown RBP6.07□□□□□ -1.44
CCDC7-216ENST00000640058 TMX2Q9Y320 296 aa6.07□□□□□ -1.44
CCDC7-216ENST00000640058 CGB1A6NKQ9 187 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms