RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 CUL4AQ13619 759 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 RUNX3Q13761 415 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 STK38Q15208 465 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 INTS6LQ5JSJ4 861 aaKnown RBP15.78■□□□□ 0.12
TARDBP-231ENST00000639599 TXNDC11Q6PKC3 985 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 CRELD2Q6UXH1 353 aaPredicted RBP15.78■□□□□ 0.12
TARDBP-231ENST00000639599 LRRTM3Q86VH5 581 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 SCN4BQ8IWT1 228 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 ADGRF2Q8IZF7 708 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 GPD1LQ8N335 351 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 ACBD6Q9BR61 282 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 RTKNQ9BST9 563 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 SLC46A2Q9BY10 475 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 PANK2Q9BZ23 570 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 ZSCAN16Q9H4T2 348 aaPredicted RBP15.78■□□□□ 0.12
TARDBP-231ENST00000639599 PCIF1Q9H4Z3 704 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 ABCB6Q9NP58 842 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 TDP1Q9NUW8 608 aa15.78■□□□□ 0.12
TARDBP-231ENST00000639599 MYH11P35749 1972 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 FOXD2O60548 495 aaPredicted RBP15.77■□□□□ 0.12
TARDBP-231ENST00000639599 LRP3O75074 770 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 PPP1R37O75864 691 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 CCDC192P0DO97 292 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 TDGF1P13385 188 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 ACAT1P24752 427 aaKnown RBP15.77■□□□□ 0.12
TARDBP-231ENST00000639599 IFNAR2P48551 515 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 AMPD3Q01432 767 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 KCNA1Q09470 495 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 RESTQ13127 1097 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 PDGFRLQ15198 375 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 SURF1Q15526 300 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 C4orf50Q6ZRC1 276 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 CPA6Q8N4T0 437 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 PDILTQ8N807 584 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 C1orf127Q8N9H9 656 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 LEO1Q8WVC0 666 aaPredicted RBP15.77■□□□□ 0.12
TARDBP-231ENST00000639599 MTMR12Q9C0I1 747 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 IKZF4Q9H2S9 585 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 EBF3Q9H4W6 596 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 IL21Q9HBE4 155 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 L1RE1Q9UN81 338 aa15.77■□□□□ 0.12
TARDBP-231ENST00000639599 CFAP54Q96N23 3096 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 TRAV19A0A0A6YYK7 116 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 SOBPA7XYQ1 873 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 PRPF6O94906 941 aaKnown RBP15.76■□□□□ 0.11
TARDBP-231ENST00000639599 PAPSS2O95340 614 aaPredicted RBP15.76■□□□□ 0.11
TARDBP-231ENST00000639599 CKMP06732 381 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 SYT1P21579 422 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 KCNA4P22459 653 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 ANXA13P27216 316 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 GPR15P49685 360 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 PDE6CP51160 858 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 ATXN1P54253 815 aaKnown RBP15.76■□□□□ 0.11
TARDBP-231ENST00000639599 KCNB1Q14721 858 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 DDR2Q16832 855 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 SDHAF4Q5VUM1 108 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 TXNDC8Q6A555 127 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 FAM173BQ6P4H8 233 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 TOP6BLQ8N6T0 577 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 SPATA18Q8TC71 538 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 NETO1Q8TDF5 533 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 DNAJC19Q96DA6 116 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 LRRC3BQ96PB8 259 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 CBWD1Q9BRT8 395 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 PDE11AQ9HCR9 933 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
TARDBP-231ENST00000639599 PATJQ8NI35 1801 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 ZNF233A6NK53 670 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 USP17L7P0C7H9 530 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 CYP2F1P24903 491 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 CASP5P51878 434 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 NR1H3Q13133 447 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 GAS6Q14393 721 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 SLC39A14Q15043 492 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
TARDBP-231ENST00000639599 TRIM68Q6AZZ1 485 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 MON1AQ86VX9 555 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 C12orf50Q8NA57 414 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-231ENST00000639599 USP13Q92995 863 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-231ENST00000639599 FUBP3Q96I24 572 aaKnown RBP eCLIP15.75■□□□□ 0.11
TARDBP-231ENST00000639599 ZNF396Q96N95 335 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-231ENST00000639599 FNBP1Q96RU3 617 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 MMS19Q96T76 1030 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 KIAA1586Q9HCI6 787 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 SEMA4GQ9NTN9 838 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 TMLHEQ9NVH6 421 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 DUS2Q9NX74 493 aaKnown RBP15.75■□□□□ 0.11
TARDBP-231ENST00000639599 EHD2Q9NZN4 543 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 GTF3C4Q9UKN8 822 aa15.75■□□□□ 0.11
TARDBP-231ENST00000639599 PDCD11Q14690 1871 aaKnown RBP15.75■□□□□ 0.11
TARDBP-231ENST00000639599 GVINP1Q7Z2Y8 2422 aa15.74■□□□□ 0.11
TARDBP-231ENST00000639599 CACNA1IQ9P0X4 2223 aa15.74■□□□□ 0.11
TARDBP-231ENST00000639599 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.74■□□□□ 0.11
TARDBP-231ENST00000639599 F11P03951 625 aa15.74■□□□□ 0.11
TARDBP-231ENST00000639599 ASIC1P78348 528 aa15.74■□□□□ 0.11
TARDBP-231ENST00000639599 FAM160A1Q05DH4 1040 aa15.74■□□□□ 0.11
TARDBP-231ENST00000639599 DMWDQ09019 674 aa15.74■□□□□ 0.11
TARDBP-231ENST00000639599 PSMD2Q13200 908 aa15.74■□□□□ 0.11
TARDBP-231ENST00000639599 SRSF5Q13243 272 aaKnown RBP15.74■□□□□ 0.11
TARDBP-231ENST00000639599 CCINQ13939 588 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms