RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 RNF39Q9H2S5 420 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 SLITRK6Q9H5Y7 841 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 ST7Q9NRC1 585 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 HOMER3Q9NSC5 361 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 RBM12Q9NTZ6 932 aaKnown RBP6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 DDX56Q9NY93 547 aaKnown RBP6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 STIM2Q9P246 746 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 RASAL2Q9UJF2 1139 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 TSPAN16Q9UKR8 245 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 USTQ9Y2C2 406 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 PTCH2Q9Y6C5 1203 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 GRIN2DO15399 1336 aa6.66□□□□□ -1.34
CACNA1D-227ENST00000637844 A0A0U1RQF3 1178 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 TMEM191CA6NGB0 347 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ARL5CA6NH57 179 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 PODXLO00592 558 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CYB561D2O14569 222 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 RNF8O76064 485 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 HEXIM1O94992 359 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 EOMESO95936 686 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 KRT7P08729 469 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ODC1P11926 461 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CKBP12277 381 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SELPP16109 830 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 IBSPP21815 317 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 WARSP23381 471 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 PSMA2P25787 234 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CHRNA3P32297 505 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 TNNT3P45378 269 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ACADSBP45954 432 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 GABRB2P47870 512 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 LHX1P48742 406 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 BCAT1P54687 386 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 GSCP56915 257 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 LILRA4P59901 499 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CAP1Q01518 475 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 BST2Q10589 180 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 PTP4A2Q12974 167 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 PDCLQ13371 301 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ZNF211Q13398 564 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ORC1Q13415 861 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 DHX34Q14147 1143 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 DSC3Q14574 896 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SMC1AQ14683 1233 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ACAP1Q15027 740 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SOWAHAQ2M3V2 549 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 TRIM71Q2Q1W2 868 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 PTPN20Q4JDL3 420 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 C2CD6Q53TS8 623 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ZNF618Q5T7W0 954 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 FAM102AQ5T9C2 384 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CYP4A22Q5TCH4 519 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SCARA3Q6AZY7 606 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 OR6B2Q6IFH4 312 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CC2D1AQ6P1N0 951 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 GLB1LQ6UWU2 654 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 LRRC8DQ7L1W4 858 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 HDXQ7Z353 690 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CRYBG2Q8N1P7 616 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 NIPA2Q8N8Q9 360 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SLC43A3Q8NBI5 491 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 UBA3Q8TBC4 463 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SPATA18Q8TC71 538 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SH3TC2Q8TF17 1288 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CD101Q93033 1021 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 TWNKQ96RR1 684 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 GAD1Q99259 594 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 LRRC1Q9BTT6 524 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 AP1M1Q9BXS5 423 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 TRPV6Q9H1D0 765 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 EPC1Q9H2F5 836 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 AGO3Q9H9G7 860 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 GOLGA2P5Q9HBQ8 144 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CYLDQ9NQC7 956 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 RGS18Q9NS28 235 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 ASNSD1Q9NWL6 643 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 SMARCAL1Q9NZC9 954 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 EHD2Q9NZN4 543 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 HMGXB4Q9UGU5 601 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 CHORDC1Q9UHD1 332 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 FEZ2Q9UHY8 353 aaPredicted RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 DSEQ9UL01 958 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 UTP11Q9Y3A2 253 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 TDRD15B5MCY1 1934 aaKnown RBP6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 TRIP11Q15643 1979 aa6.65□□□□□ -1.34
CACNA1D-227ENST00000637844 FAM187AA6NFU0 413 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 PTGESO14684 152 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 PPEF2O14830 753 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 RRP9O43818 475 aaKnown RBP6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 PHF2O75151 1096 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 ZRANB2O95218 330 aaKnown RBP eCLIP6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 PARNO95453 639 aaKnown RBP6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 PDGFRBP09619 1106 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 COL6A1P12109 1028 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 GPD1P21695 349 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 TNFRSF8P28908 595 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 PCSK1P29120 753 aa6.64□□□□□ -1.35
CACNA1D-227ENST00000637844 GBP1P32455 592 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms