RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 FANCMQ8IYD8 2048 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 POLR2DO15514 142 aaKnown RBP21.57■■□□□ 1.04
CLN6-222ENST00000637667 PRPF40AO75400 957 aaKnown RBP21.57■■□□□ 1.04
CLN6-222ENST00000637667 TNNC2P02585 160 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 HMGA1P17096 107 aaKnown RBP21.57■■□□□ 1.04
CLN6-222ENST00000637667 ACAT1P24752 427 aaKnown RBP21.57■■□□□ 1.04
CLN6-222ENST00000637667 GPR15P49685 360 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 KPNA1P52294 538 aaPredicted RBP21.57■■□□□ 1.04
CLN6-222ENST00000637667 DUOXA2Q1HG44 320 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ARHGAP29Q52LW3 1261 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 OSTM1Q86WC4 334 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ADGRF2Q8IZF7 708 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ZNF507Q8TCN5 953 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ATRIPQ8WXE1 791 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ZFYVE19Q96K21 471 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 IER2Q9BTL4 223 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 SLC46A2Q9BY10 475 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 C8orf33Q9H7E9 229 aaPredicted RBP21.57■■□□□ 1.04
CLN6-222ENST00000637667 KIAA1586Q9HCI6 787 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ABCB6Q9NP58 842 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ZSCAN32Q9NX65 697 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 ZMYM5Q9UJ78 669 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 R3HCC1Q9Y3T6 440 aaKnown RBP21.57■■□□□ 1.04
CLN6-222ENST00000637667 COL4A2P08572 1712 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 CEP250Q9BV73 2442 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 TCHHQ07283 1943 aa21.57■■□□□ 1.04
CLN6-222ENST00000637667 SLC38A8A6NNN8 435 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 PCSK1P29120 753 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 ME1P48163 572 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 SOX9P48436 509 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 LHX1P48742 406 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 NLRP12P59046 1061 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 MYO1EQ12965 1108 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 SOWAHAQ2M3V2 549 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 C1orf228Q6PIY5 440 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 TSSK4Q6SA08 328 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 MAMSTRQ6ZN01 415 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 UNC13DQ70J99 1090 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 TMEM150AQ86TG1 271 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 SUMF1Q8NBK3 374 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 BPIFB1Q8TDL5 484 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 NELL1Q92832 810 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 HPDLQ96IR7 371 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 PKMYT1Q99640 499 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 AGPAT3Q9NRZ7 376 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 PCDHA7Q9UN72 937 aa21.56■■□□□ 1.04
CLN6-222ENST00000637667 TICRRQ7Z2Z1 1910 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 GABRDO14764 452 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 TGFB1I1O43294 461 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 F11P03951 625 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 CSH1P0DML2 217 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 CSH2P0DML3 217 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 CHRNB1P11230 501 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 CYP2F1P24903 491 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 RPL10AP62906 217 aaKnown RBP21.55■■□□□ 1.04
CLN6-222ENST00000637667 PLCB2Q00722 1185 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 EHHADHQ08426 723 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 SDHAF4Q5VUM1 108 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 ATL3Q6DD88 541 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 CMTM8Q8IZV2 173 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 ZBTB44Q8NCP5 570 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 SMG9Q9H0W8 520 aaKnown RBP21.55■■□□□ 1.04
CLN6-222ENST00000637667 FAM13BQ9NYF5 915 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 GTF3C4Q9UKN8 822 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 PATJQ8NI35 1801 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 UBE4BO95155 1302 aa21.55■■□□□ 1.04
CLN6-222ENST00000637667 MYBPHLA2RUH7 354 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 SPECC1L-ADORA2AF8WAN1 911 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 HCRTO43612 131 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 DDX6P26196 483 aaKnown RBP eCLIP21.54■■□□□ 1.04
CLN6-222ENST00000637667 CASP1P29466 404 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 CTHP32929 405 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 SNRNP35Q16560 246 aaKnown RBP21.54■■□□□ 1.04
CLN6-222ENST00000637667 DDR2Q16832 855 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 CCDC142Q17RM4 750 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 RESP18Q5W5W9 173 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 DPH6Q7L8W6 267 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 LIMS2Q7Z4I7 341 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 RALGPS2Q86X27 583 aaPredicted RBP21.54■■□□□ 1.04
CLN6-222ENST00000637667 WDR49Q8IV35 697 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 NELFCDQ8IXH7 590 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 CELF5Q8N6W0 485 aaKnown RBP21.54■■□□□ 1.04
CLN6-222ENST00000637667 STKLD1Q8NE28 680 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 TTC8Q8TAM2 541 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 SCFD1Q8WVM8 642 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 RUBCNQ92622 972 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 HINFPQ9BQA5 517 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 FAM126AQ9BYI3 521 aaPredicted RBP21.54■■□□□ 1.04
CLN6-222ENST00000637667 BLZF1Q9H2G9 400 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 THG1LQ9NWX6 298 aaKnown RBP21.54■■□□□ 1.04
CLN6-222ENST00000637667 GTSE1Q9NYZ3 720 aa21.54■■□□□ 1.04
CLN6-222ENST00000637667 MAGED2Q9UNF1 606 aaPredicted RBP21.54■■□□□ 1.04
CLN6-222ENST00000637667 AVPR1AP37288 418 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 CYP2J2P51589 502 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 SNRPFP62306 86 aaKnown RBP21.53■■□□□ 1.04
CLN6-222ENST00000637667 PKP1Q13835 747 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 LRRC32Q14392 662 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 CFAP221Q4G0U5 840 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 TXNDC11Q6PKC3 985 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 HS2ST1Q7LGA3 356 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms