RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CCDC65Q8IXS2 484 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 LINC00301Q8NCQ3 95 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 LEO1Q8WVC0 666 aaPredicted RBP19.86■□□□□ 0.77
CLN6-220ENST00000637450 SECISBP2LQ93073 1101 aaKnown RBP19.86■□□□□ 0.77
CLN6-220ENST00000637450 FAM84AQ96KN4 292 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 SMG9Q9H0W8 520 aaKnown RBP19.86■□□□□ 0.77
CLN6-220ENST00000637450 FOXD4L1Q9NU39 408 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 THG1LQ9NWX6 298 aaKnown RBP19.86■□□□□ 0.77
CLN6-220ENST00000637450 GDAP2Q9NXN4 497 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 DDX43Q9NXZ2 648 aaKnown RBP19.86■□□□□ 0.77
CLN6-220ENST00000637450 DLL3Q9NYJ7 618 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 SIX4Q9UIU6 781 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 TICRRQ7Z2Z1 1910 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 TSC2P49815 1807 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 SOBPA7XYQ1 873 aa19.85■□□□□ 0.77
CLN6-220ENST00000637450 PRPF40AO75400 957 aaKnown RBP19.85■□□□□ 0.77
CLN6-220ENST00000637450 PAPSS2O95340 614 aaPredicted RBP19.85■□□□□ 0.77
CLN6-220ENST00000637450 DDX6P26196 483 aaKnown RBP eCLIP19.85■□□□□ 0.77
CLN6-220ENST00000637450 GPR15P49685 360 aa19.85■□□□□ 0.77
CLN6-220ENST00000637450 BFSP1Q12934 665 aa19.85■□□□□ 0.77
CLN6-220ENST00000637450 DGLUCYQ7Z3D6 616 aa19.85■□□□□ 0.77
CLN6-220ENST00000637450 GPD1LQ8N335 351 aa19.85■□□□□ 0.77
CLN6-220ENST00000637450 SPATA18Q8TC71 538 aa19.85■□□□□ 0.77
CLN6-220ENST00000637450 PKMYT1Q99640 499 aa19.85■□□□□ 0.77
CLN6-220ENST00000637450 KIAA0391O15091 583 aaKnown RBP19.84■□□□□ 0.77
CLN6-220ENST00000637450 KRT19P08727 400 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 CSH1P0DML2 217 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 CSH2P0DML3 217 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 ACAT1P24752 427 aaKnown RBP19.84■□□□□ 0.77
CLN6-220ENST00000637450 CYP2F1P24903 491 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 AVPR1AP37288 418 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 MYL7Q01449 175 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 PON2Q15165 354 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 STK38Q15208 465 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 E2F4Q16254 413 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 ITPRIPL2Q3MIP1 535 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 INTS6LQ5JSJ4 861 aaKnown RBP19.84■□□□□ 0.77
CLN6-220ENST00000637450 TXNDC8Q6A555 127 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 TOP6BLQ8N6T0 577 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 MAB21L3Q8N8X9 362 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 NOC3LQ8WTT2 800 aaKnown RBP19.84■□□□□ 0.77
CLN6-220ENST00000637450 FAM83CQ9BQN1 747 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 MTMR12Q9C0I1 747 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 LRRC27Q9C0I9 530 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 TNMDQ9H2S6 317 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 ABCB6Q9NP58 842 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 GKN1Q9NS71 199 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 GTF3C4Q9UKN8 822 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 CCL26Q9Y258 94 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
CLN6-220ENST00000637450 K7ELQ4 463 aaPredicted RBP19.83■□□□□ 0.77
CLN6-220ENST00000637450 K7ESF4 209 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 GABRDO14764 452 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 SPTLC2O15270 562 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 TMEM191BP0C7N4 346 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 TGM1P22735 817 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 LHX1P48742 406 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 RPL10AP62906 217 aaKnown RBP19.83■□□□□ 0.77
CLN6-220ENST00000637450 CCINQ13939 588 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 DDR2Q16832 855 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 RSPO4Q2I0M5 234 aaPredicted RBP19.83■□□□□ 0.77
CLN6-220ENST00000637450 SDHAF4Q5VUM1 108 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 Q6ZS52 159 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 STXBP4Q6ZWJ1 553 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 MON1AQ86VX9 555 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 OSTM1Q86WC4 334 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 SYNPOQ8N3V7 929 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 GLIS3Q8NEA6 775 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 USP13Q92995 863 aaPredicted RBP19.83■□□□□ 0.77
CLN6-220ENST00000637450 BACH2Q9BYV9 841 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 TDP1Q9NUW8 608 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 INTS13Q9NVM9 706 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 KBTBD4Q9NVX7 518 aa19.83■□□□□ 0.77
CLN6-220ENST00000637450 MAGED2Q9UNF1 606 aaPredicted RBP19.83■□□□□ 0.77
CLN6-220ENST00000637450 PPP6R2O75170 966 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 HOXD13P35453 343 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 DMWDQ09019 674 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 SOWAHAQ2M3V2 549 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 LMBRD2Q68DH5 695 aaPredicted RBP19.82■□□□□ 0.76
CLN6-220ENST00000637450 DPH6Q7L8W6 267 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 LIMS2Q7Z4I7 341 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 ADGRF2Q8IZF7 708 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 STKLD1Q8NE28 680 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 MRPS31Q92665 395 aaKnown RBP19.82■□□□□ 0.76
CLN6-220ENST00000637450 HPS3Q969F9 1004 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 ANKRD36BP1Q96IX9 119 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 TRIM9Q9C026 710 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 CUEDC2Q9H467 287 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 C2orf42Q9NWW7 574 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 TFIP11Q9UBB9 837 aaKnown RBP19.82■□□□□ 0.76
CLN6-220ENST00000637450 GMEB2Q9UKD1 530 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 RAB23Q9ULC3 237 aa19.82■□□□□ 0.76
CLN6-220ENST00000637450 ZNF233A6NK53 670 aa19.81■□□□□ 0.76
CLN6-220ENST00000637450 CHURC1-FNTBB4DL54 471 aa19.81■□□□□ 0.76
CLN6-220ENST00000637450 HRO43593 1189 aa19.81■□□□□ 0.76
CLN6-220ENST00000637450 HCRTO43612 131 aa19.81■□□□□ 0.76
CLN6-220ENST00000637450 NOL4O94818 638 aa19.81■□□□□ 0.76
CLN6-220ENST00000637450 PCSK1P29120 753 aa19.81■□□□□ 0.76
CLN6-220ENST00000637450 FNTBP49356 437 aa19.81■□□□□ 0.76
CLN6-220ENST00000637450 MYO1EQ12965 1108 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms