RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 PRPF40AO75400 957 aaKnown RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 LDHAP00338 332 aaKnown RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 HMGA1P17096 107 aaKnown RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 CDR1P51861 262 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 RPL10AP62906 217 aaKnown RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 DYMQ7RTS9 669 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 CACNA2D4Q7Z3S7 1137 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 TMEM150AQ86TG1 271 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 MON1AQ86VX9 555 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 SFR1Q86XK3 245 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 CACTINQ8WUQ7 758 aaKnown RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 LEO1Q8WVC0 666 aaPredicted RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 GAB3Q8WWW8 586 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 USP13Q92995 863 aaPredicted RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 ACBD6Q9BR61 282 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 ABCB6Q9NP58 842 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 SLC8A2Q9UPR5 921 aa19.24■□□□□ 0.67
CIITA-215ENST00000637439 TPRP12270 2363 aaKnown RBP19.24■□□□□ 0.67
CIITA-215ENST00000637439 ZNF638Q14966 1978 aaKnown RBP19.23■□□□□ 0.67
CIITA-215ENST00000637439 ACACBO00763 2458 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 HUS1O60921 280 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 RPP40O75818 363 aaKnown RBP19.23■□□□□ 0.67
CIITA-215ENST00000637439 PPP1R37O75864 691 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 GAP43P17677 238 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 ADSSP30520 456 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 ZNF268Q14587 947 aaPredicted RBP19.23■□□□□ 0.67
CIITA-215ENST00000637439 PDGFRLQ15198 375 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 FSTL4Q6MZW2 842 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 TMEM86AQ8N2M4 240 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 CAMKK1Q8N5S9 505 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 ACCSQ96QU6 501 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 PI4K2AQ9BTU6 479 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 STRA6Q9BX79 667 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 EBF3Q9H4W6 596 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 MRPL44Q9H9J2 332 aaKnown RBP19.23■□□□□ 0.67
CIITA-215ENST00000637439 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
CIITA-215ENST00000637439 HPS4Q9NQG7 708 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 MAGED2Q9UNF1 606 aaPredicted RBP19.23■□□□□ 0.67
CIITA-215ENST00000637439 CCL26Q9Y258 94 aa19.23■□□□□ 0.67
CIITA-215ENST00000637439 AKAP3O75969 853 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 CD2BP2O95400 341 aaKnown RBP19.22■□□□□ 0.67
CIITA-215ENST00000637439 DRD1P21728 446 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 LIMK1P53667 647 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 TFAMQ00059 246 aaKnown RBP19.22■□□□□ 0.67
CIITA-215ENST00000637439 MYL7Q01449 175 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 FBXO43Q4G163 708 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
CIITA-215ENST00000637439 TXNDC8Q6A555 127 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 IL31Q6EBC2 164 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 BRSK2Q8IWQ3 736 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 PDCL2Q8N4E4 241 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 LRRC52Q8N7C0 313 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 C12orf50Q8NA57 414 aaPredicted RBP19.22■□□□□ 0.67
CIITA-215ENST00000637439 SPATA18Q8TC71 538 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 TRMT2BQ96GJ1 504 aaKnown RBP19.22■□□□□ 0.67
CIITA-215ENST00000637439 FAM213AQ9BRX8 229 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 TMLHEQ9NVH6 421 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 AGAP1Q9UPQ3 857 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 OBSL1O75147 1896 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 CACNA1BQ00975 2339 aa19.22■□□□□ 0.67
CIITA-215ENST00000637439 AXIN1O15169 862 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 GDF9O60383 454 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 ITGB3P05106 788 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 CCDC192P0DO97 292 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 POLR2BP30876 1174 aaKnown RBP19.21■□□□□ 0.67
CIITA-215ENST00000637439 TXLNAP40222 546 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 ALCAMQ13740 583 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 AASDHQ4L235 1098 aaPredicted RBP19.21■□□□□ 0.67
CIITA-215ENST00000637439 TRIM68Q6AZZ1 485 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 SV2BQ7L1I2 683 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 CPA6Q8N4T0 437 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 EPSTI1Q96J88 318 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 ARRDC1-AS1Q9H2J1 176 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 DDX43Q9NXZ2 648 aaKnown RBP19.21■□□□□ 0.67
CIITA-215ENST00000637439 ITGA11Q9UKX5 1188 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 PCDHB13Q9Y5F0 798 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 GREB1Q4ZG55 1949 aa19.21■□□□□ 0.67
CIITA-215ENST00000637439 KMT2BQ9UMN6 2715 aaPredicted RBP19.2■□□□□ 0.66
CIITA-215ENST00000637439 OTOL1A6NHN0 477 aaPredicted RBP19.2■□□□□ 0.66
CIITA-215ENST00000637439 NOL4O94818 638 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 EPN2O95208 641 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 ZNF806P0C7X5 589 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 GARTP22102 1010 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 RAP1GAPP47736 663 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 INTS6LQ5JSJ4 861 aaKnown RBP19.2■□□□□ 0.66
CIITA-215ENST00000637439 RRAGBQ5VZM2 374 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 PKN3Q6P5Z2 889 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 SYCP3Q8IZU3 236 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 C1orf127Q8N9H9 656 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 MYRFLQ96LU7 910 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 P2RY13Q9BPV8 354 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 IKZF4Q9H2S9 585 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 TMEM206Q9H813 350 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 OLFML3Q9NRN5 406 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 GDAP2Q9NXN4 497 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 RBAKQ9NYW8 714 aaPredicted RBP19.2■□□□□ 0.66
CIITA-215ENST00000637439 L1RE1Q9UN81 338 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 PCDHGA5Q9Y5G8 931 aa19.2■□□□□ 0.66
CIITA-215ENST00000637439 SPAG17Q6Q759 2223 aa19.19■□□□□ 0.66
CIITA-215ENST00000637439 TULP1O00294 542 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms