RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 BRCA2P51587 3418 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ATRNL1Q5VV63 1379 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 DOCK1Q14185 1865 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ANKRD33BA6NCL7 494 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 DDTLA6NHG4 134 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 FAM196BA6NMK8 535 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CIB2O75838 187 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 INHAP05111 366 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ICAM1P05362 532 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 PSAPP07602 524 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MSH2P43246 934 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MAGEA4P43358 317 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 VPS41P49754 854 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SH3BGRP55822 239 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 PPARDQ03181 441 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ZNF268Q14587 947 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MTFR1Q15390 333 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 TAF11Q15544 211 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ARHGEF16Q5VV41 709 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 PCNX4Q63HM2 1172 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 DNAJC24Q6P3W2 148 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MAP4K3Q8IVH8 894 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 KATNAL2Q8IYT4 538 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ATP11CQ8NB49 1132 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CFAP61Q8NHU2 1237 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ZNF398Q8TD17 642 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 FAM151AQ8WW52 585 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 LPAR1Q92633 364 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 INPP5DQ92835 1189 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CCDC97Q96F63 343 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 RBM15Q96T37 977 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SLC9A7Q96T83 725 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CBWD1Q9BRT8 395 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 DNAI2Q9GZS0 605 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MIS12Q9H081 205 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 TRABDQ9H4I3 376 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ETNK1Q9HBU6 452 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 PSMC3IPQ9P2W1 217 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SUFUQ9UMX1 484 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 STARD13Q9Y3M8 1113 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 GOLGA8IPA6NC78 632 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SPDYE5A6NIY4 337 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 GOLGA8JA6NMD2 632 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 PROB1E7EW31 1015 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 I3L4J1 428 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 WDR46O15213 610 aaKnown RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 RAD17O75943 681 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 GJB6O95452 261 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MYCLP12524 364 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 TSHRP16473 764 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 IGFBP4P22692 258 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CA4P22748 312 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 RARRES1P49788 294 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SLC18A1P54219 525 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CACNB3P54284 484 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 NCKAP1LP55160 1127 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 IRX1P78414 480 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 FMO1Q01740 532 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MORF4L2Q15014 288 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 LRRC14Q15048 493 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 KYNUQ16719 465 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CCDC142Q17RM4 750 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 PARP6Q2NL67 630 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 WASHC2DQ5SRD0 308 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 C1orf53Q5VUE5 145 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ANKRD20A3Q5VUR7 823 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 EXOC3L1Q86VI1 746 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 DNAAF5Q86Y56 855 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 KSR1Q8IVT5 923 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MCOLN2Q8IZK6 566 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ZCCHC9Q8N567 271 aaKnown RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 PCSK9Q8NBP7 692 aaKnown RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 DEPTORQ8TB45 409 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 MCUR1Q96AQ8 359 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 CEP170P1Q96L14 293 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 DEFB118Q96PH6 123 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ARHGAP39Q9C0H5 1083 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ADAM7Q9H2U9 754 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 KCNH7Q9NS40 1196 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 NINJ2Q9NZG7 142 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 STOML1Q9UBI4 398 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 FAM198AQ9UFP1 575 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 NOCTQ9UK39 431 aaKnown RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 STRIP2Q9ULQ0 834 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SHOC2Q9UQ13 582 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 TSC2P49815 1807 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 IQANK1A0A1B0GTG1 560 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 TREHO43280 583 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 EXTL3O43909 919 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SPAG6O75602 509 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 STAM2O75886 525 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 DGAT1O75907 488 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 RPSAP08865 295 aaKnown RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 SUPT20HL2P0C7V6 817 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 ARP10275 920 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 KCNJ1P48048 391 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 POLGP54098 1239 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-214ENST00000637038 RTP1P59025 263 aa4.19□□□□□ -1.74
SCN1A-214ENST00000637038 NCALDP61601 193 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms