RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CLUHO75153 1309 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 E7ESA3 106 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 SMAPO00193 183 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 ASS1P00966 412 aaKnown RBP15.31■□□□□ 0.04
CLN6-215ENST00000636674 SUPT20HL2P0C7V6 817 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 T-ENOLP0DO92 83 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 TSHRP16473 764 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 GNAZP19086 355 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 PHBP35232 272 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 ARL2P36404 184 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 OAZ1P54368 228 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 GPX6P59796 221 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 OGDHQ02218 1023 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 PDIA2Q13087 525 aaKnown RBP15.31■□□□□ 0.04
CLN6-215ENST00000636674 DGKZQ13574 1117 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 HIF1AQ16665 826 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 SUPT20HL1Q3ZLR7 823 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 CMPK2Q5EBM0 449 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 HHATQ5VTY9 493 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 C9orf131Q5VYM1 1079 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 ATP11CQ8NB49 1132 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 REPS2Q8NFH8 660 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 CFAP61Q8NHU2 1237 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 NSUN6Q8TEA1 469 aaKnown RBP15.31■□□□□ 0.04
CLN6-215ENST00000636674 MCEEQ96PE7 176 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 MSTO1Q9BUK6 570 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 MAF1Q9H063 256 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 SAR1AQ9NR31 198 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 LNPEPQ9UIQ6 1025 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 ZMYND8Q9ULU4 1186 aaPredicted RBP15.31■□□□□ 0.04
CLN6-215ENST00000636674 SNCAIPQ9Y6H5 919 aa15.31■□□□□ 0.04
CLN6-215ENST00000636674 LCTP09848 1927 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 F8VP50 259 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 WNT10BO00744 389 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 PEX11AO75192 247 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 GLRA2P23416 452 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 TARSP26639 723 aaKnown RBP15.3■□□□□ 0.04
CLN6-215ENST00000636674 TAZQ16635 292 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 KLHL38Q2WGJ6 581 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 MTERF2Q49AM1 385 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 WASHC2DQ5SRD0 308 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 ADGRD1Q6QNK2 874 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 OTOAQ7RTW8 1153 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 PPIL6Q8IXY8 311 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 ENDOVQ8N8Q3 282 aaKnown RBP15.3■□□□□ 0.04
CLN6-215ENST00000636674 TMEM35BQ8NCS4 154 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 OR5B17Q8NGF7 314 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 ASAP3Q8TDY4 903 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 MZB1Q8WU39 189 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 ZNF75CPQ92670 426 aaPredicted RBP15.3■□□□□ 0.04
CLN6-215ENST00000636674 ALKBH8Q96BT7 664 aaKnown RBP15.3■□□□□ 0.04
CLN6-215ENST00000636674 TEPSINQ96N21 525 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
CLN6-215ENST00000636674 IMPG2Q9BZV3 1241 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 ACSS3Q9H6R3 686 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 TMEM134Q9H6X4 195 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 CYP39A1Q9NYL5 469 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 RABGEF1Q9UJ41 708 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 PCDHGC3Q9UN70 934 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 RIPK3Q9Y572 518 aa15.3■□□□□ 0.04
CLN6-215ENST00000636674 C3orf70A6NLC5 250 aaPredicted RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 SPATA31C2B4DYI2 1134 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 TM9SF1O15321 606 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 LUC7L3O95232 432 aaKnown RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 LVRNQ6Q4G3 990 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 TTC13Q8NBP0 860 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 FAM13CQ8NE31 585 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 ATG4CQ96DT6 458 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 ZBTB45Q96K62 511 aaPredicted RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 ZNRF3Q9ULT6 936 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 TELO2Q9Y4R8 837 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 MAFBQ9Y5Q3 323 aaPredicted RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 A0A1W2PPM1 405 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 K7ERI5 159 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 SGK1O00141 431 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 HGSO14964 777 aaPredicted RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 FGFR1P11362 822 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 CALB2P22676 271 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 EIF4BP23588 611 aaKnown RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 SSTR3P32745 418 aaPredicted RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 ARL4CP56559 192 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 MTMR2Q13614 643 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 ZFYVE27Q5T4F4 411 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 FYB2Q5VWT5 728 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 TXNRD3NBQ6F5E7 133 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 DCUN1D2Q6PH85 259 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 WDR49Q8IV35 697 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 ZNF276Q8N554 614 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 NAT8LQ8N9F0 302 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 STK32AQ8WU08 396 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 TMEM121Q9BTD3 319 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 TARS2Q9BW92 718 aaKnown RBP15.29■□□□□ 0.04
CLN6-215ENST00000636674 RNF181Q9P0P0 153 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 HAO1Q9UJM8 370 aa15.29■□□□□ 0.04
CLN6-215ENST00000636674 ATG7O95352 703 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms