RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 FNIP2Q9P278 1114 aa14.22□□□□□ -0.13
CHRNA4-216ENST00000636652 NOCTQ9UK39 431 aaKnown RBP14.22□□□□□ -0.13
CHRNA4-216ENST00000636652 IRAK3Q9Y616 596 aa14.22□□□□□ -0.13
CHRNA4-216ENST00000636652 C2CD2LO14523 706 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 FSCN2O14926 492 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 GRM6O15303 877 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 THAP12O43422 761 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 MED7O43513 233 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 ATP2C2O75185 946 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 FECHP22830 423 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 BRD2P25440 801 aaKnown RBP14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 ANXA13P27216 316 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 SMARCB1Q12824 385 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 NFE2Q16621 373 aaPredicted RBP14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 HGSNATQ68CP4 663 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 SLC8B1Q6J4K2 584 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 FAM171BQ6P995 826 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 WDR59Q6PJI9 974 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 TMC7Q7Z402 723 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 NOP9Q86U38 636 aaKnown RBP14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 GPIHBP1Q8IV16 184 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 MYCBPAPQ8TBZ2 947 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 TFAP2BQ92481 460 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 ACP6Q9NPH0 428 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 ENTPD7Q9NQZ7 604 aa14.21□□□□□ -0.13
CHRNA4-216ENST00000636652 SSU72P8A0A1W2PR75 194 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 MYBPHLA2RUH7 354 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 O00370 1275 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 LPXNO60711 386 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 CXCL14O95715 111 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 PTMAP06454 111 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 DNAJB1P25685 340 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 NDUFV1P49821 464 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 ERVFC1P60507 584 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 CDR2Q01850 454 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 GPR17Q13304 367 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 CAMK1Q14012 370 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 CNGA2Q16280 664 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 TDRD12Q587J7 1177 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 MDH1BQ5I0G3 518 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 RSPO2Q6UXX9 243 aaPredicted RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 MRPL43Q8N983 215 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 C12orf29Q8N999 325 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 C2orf15Q8WU43 125 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 ZNF606Q8WXB4 792 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 DDX1Q92499 740 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 MYLPFQ96A32 169 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 TMEM209Q96SK2 561 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 HNRNPABQ99729 332 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 CLSTN3Q9BQT9 956 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 ZSWIM1Q9BR11 485 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 SYT11Q9BT88 431 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 HAUS4Q9H6D7 363 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 CERS4Q9HA82 394 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 FAM49BQ9NUQ9 324 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 GTF3C4Q9UKN8 822 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 CDY1Q9Y6F8 540 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 GBF1Q92538 1859 aa14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-216ENST00000636652 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 CALCAP01258 141 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 OR4Q2P0C623 313 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 SKILP12757 684 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 CCDC130P13994 396 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 CPB1P15086 417 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 RAB33AQ14088 237 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 SLC39A12Q504Y0 691 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 PLPP4Q5VZY2 271 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 LCLAT1Q6UWP7 414 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 CYP26C1Q6V0L0 522 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 TRIM72Q6ZMU5 477 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 C4orf50Q6ZRC1 276 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 ZNF571Q7Z3V5 609 aaPredicted RBP14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 LRRTM3Q86VH5 581 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 VPS36Q86VN1 386 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 TMTC1Q8IUR5 882 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 CCDC112Q8NEF3 446 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 SLC2A14Q8TDB8 520 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 SLC20A1Q8WUM9 679 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 AUTS2Q8WXX7 1259 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 CYFIP2Q96F07 1278 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 PCED1BQ96HM7 432 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 FUBP3Q96I24 572 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 BAG1Q99933 345 aaPredicted RBP14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 AGPAT1Q99943 283 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 EMILIN2Q9BXX0 1053 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 B3GNT5Q9BYG0 378 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 ZNF576Q9H609 170 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 ABCB6Q9NP58 842 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 TMLHEQ9NVH6 421 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 ARHGAP20Q9P2F6 1191 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 PCDHGC3Q9UN70 934 aa14.19□□□□□ -0.14
CHRNA4-216ENST00000636652 NLRC5Q86WI3 1866 aa14.18□□□□□ -0.14
CHRNA4-216ENST00000636652 VWA8A3KMH1 1905 aa14.18□□□□□ -0.14
CHRNA4-216ENST00000636652 C2orf71A6NGG8 1288 aa14.18□□□□□ -0.14
CHRNA4-216ENST00000636652 EPOPA6NHQ4 379 aa14.18□□□□□ -0.14
CHRNA4-216ENST00000636652 TEX28O15482 410 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms