RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SUPT20HL1Q3ZLR7 823 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 SYDE1Q6ZW31 735 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 UNC45BQ8IWX7 931 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 MICALL2Q8IY33 904 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 RCOR2Q8IZ40 523 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 ALLCQ8N6M5 410 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 RNF149Q8NC42 400 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 FBXO36Q8NEA4 188 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 RSAD2Q8WXG1 361 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 PRR11Q96HE9 360 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 TRIM56Q9BRZ2 755 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 PICK1Q9NRD5 415 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 B4GALT5O43286 388 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 ENTPD5O75356 428 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 FAM155BO75949 473 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 OATP04181 439 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 ATP11AP98196 1134 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 TAF1BQ53T94 588 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 ZNF677Q86XU0 584 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 TTC8Q8TAM2 541 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 RSRC1Q96IZ7 334 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 ZNF570Q96NI8 536 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 C15orf41Q9Y2V0 281 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 MYH9P35579 1960 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 UNC5CO95185 931 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 VCPP55072 806 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 LY6KQ17RY6 165 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 EAPPQ56P03 285 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 PLEKHG4Q58EX7 1191 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 TFDP3Q5H9I0 405 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 CENPUQ71F23 418 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 OTOAQ7RTW8 1153 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 LRRC6Q86X45 466 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 RFX6Q8HWS3 928 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 PALM2Q8IXS6 379 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 RFWD2Q8NHY2 731 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 ARHGEF3Q9NR81 526 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 HMGXB4Q9UGU5 601 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 CYTH4Q9UIA0 394 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 CNTNAP2Q9UHC6 1331 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 A0A0B4J269 797 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 CFAP69A5D8W1 941 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 ZC3H11AO75152 810 aaKnown RBP eCLIP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 STAM2O75886 525 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 PSMC1P62191 440 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 IGBP1P78318 339 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 PTPN20Q4JDL3 420 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 LONP2Q86WA8 852 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 PHF13Q86YI8 300 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 TCP10LQ8TDR4 215 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 TTC17Q96AE7 1141 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 RBM41Q96IZ5 413 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 CGRRF1Q99675 332 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 PORCNQ9H237 461 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 METTL5Q9NRN9 209 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 LGALS13Q9UHV8 139 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 INO80B-WBP1J3KQ70 363 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 KRT3P12035 628 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 GM2AP17900 193 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 CDKN2BP42772 138 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 GNPTABQ3T906 1256 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 MDH1BQ5I0G3 518 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 RNASEH2BQ5TBB1 312 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 WDR78Q5VTH9 848 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 IGDCC3Q8IVU1 814 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 ARFGAP1Q8N6T3 406 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 TMEM35BQ8NCS4 154 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 BBOF1Q8ND07 529 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 ZNF280CQ8ND82 737 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 UBA3Q8TBC4 463 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 PTPRN2Q92932 1015 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 INO80BQ9C086 356 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 ASCC2Q9H1I8 757 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 NOP53Q9NZM5 478 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 CLUHO75153 1309 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
CACNA1A-228ENST00000636610 TMEM63AO94886 807 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 CPA2P48052 419 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 TGFB2P61812 414 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 ZNF699Q32M78 642 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 C1orf228Q6PIY5 440 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 EP400NLQ6ZTU2 488 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 CTAGE3PQ8IX95 158 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 NETO2Q8NC67 525 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 KCTD6Q8NC69 237 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 ZNF75CPQ92670 426 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 PAFAH2Q99487 392 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 C17orf75Q9HAS0 396 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 FBXO6Q9NRD1 293 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 GPATCH2LQ9NWQ4 482 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 YWHAGP61981 247 aaKnown RBP eCLIP14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 IRX4P78413 519 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 CPT1BQ92523 772 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 WDR83Q9BRX9 315 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms