RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 UNC13DQ70J99 1090 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 SGMS1Q86VZ5 419 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 PRIMA1Q86XR5 153 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 FANCBQ8NB91 859 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 SHCBP1Q8NEM2 672 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 STK31Q9BXU1 1019 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 STK33Q9BYT3 514 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 MAF1Q9H063 256 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 MSL2Q9HCI7 577 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 CASS4Q9NQ75 786 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 ADARB2Q9NS39 739 aaKnown RBP5.17□□□□□ -1.58
CLN5-212ENST00000636602 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.17□□□□□ -1.58
CLN5-212ENST00000636602 SLC39A10Q9ULF5 831 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 SLC45A2Q9UMX9 530 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 MAN2B2Q9Y2E5 1009 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 PAXBP1Q9Y5B6 917 aa5.17□□□□□ -1.58
CLN5-212ENST00000636602 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 TMEM233B4DJY2 109 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 B5MCH6 92 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 INO80B-WBP1J3KQ70 363 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 PJA2O43164 708 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 HOXA3O43365 443 aaPredicted RBP5.16□□□□□ -1.58
CLN5-212ENST00000636602 STC2O76061 302 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 POMCP01189 267 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 LMNAP02545 664 aaKnown RBP5.16□□□□□ -1.58
CLN5-212ENST00000636602 GCP02774 474 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 MYL4P12829 197 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 SLC11A2P49281 568 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 UCP3P55916 312 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 CLRN1P58418 232 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 POU6F2P78424 691 aaPredicted RBP5.16□□□□□ -1.58
CLN5-212ENST00000636602 HHEXQ03014 270 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 UTP14CQ5TAP6 766 aaKnown RBP5.16□□□□□ -1.58
CLN5-212ENST00000636602 RRAGBQ5VZM2 374 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 FBXO38Q6PIJ6 1188 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 XYLT1Q86Y38 959 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 PDSS2Q86YH6 399 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 SLC15A4Q8N697 577 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 DNAJC5GQ8N7S2 189 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 OR56A3Q8NH54 315 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 IPCEF1Q8WWN9 437 aaPredicted RBP5.16□□□□□ -1.58
CLN5-212ENST00000636602 CFHR4Q92496 578 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 C18orf8Q96DM3 657 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 LRRC46Q96FV0 321 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 TCF25Q9BQ70 676 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 ISCA1Q9BUE6 129 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 INO80BQ9C086 356 aaPredicted RBP5.16□□□□□ -1.58
CLN5-212ENST00000636602 GSTO2Q9H4Y5 243 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 A1CFQ9NQ94 594 aaKnown RBP5.16□□□□□ -1.58
CLN5-212ENST00000636602 TBC1D23Q9NUY8 699 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 ZNF212Q9UDV6 495 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 PNMA2Q9UL42 364 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 LZTS1Q9Y250 596 aa5.16□□□□□ -1.58
CLN5-212ENST00000636602 CDHR4A6H8M9 788 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 MBD3L4A6NDZ8 208 aaPredicted RBP5.15□□□□□ -1.59
CLN5-212ENST00000636602 MBD3L3A6NE82 208 aaPredicted RBP5.15□□□□□ -1.59
CLN5-212ENST00000636602 RASSF9O75901 435 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 DNAJB5O75953 348 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 IL1R1P14778 569 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 CD53P19397 219 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 KLRC1P26715 233 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 PFKFB4Q16877 469 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 ZACNQ401N2 412 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 COLEC12Q5KU26 742 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 DCAF12L1Q5VU92 463 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 ANKS6Q68DC2 871 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 CCDC70Q6NSX1 233 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 CATSPERGQ6ZRH7 1159 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 USP37Q86T82 979 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 SDR16C5Q8N3Y7 309 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 ATG16L2Q8NAA4 619 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 DDX17Q92841 729 aaKnown RBP5.15□□□□□ -1.59
CLN5-212ENST00000636602 HEPHQ9BQS7 1158 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 TINAGL1Q9GZM7 467 aaPredicted RBP5.15□□□□□ -1.59
CLN5-212ENST00000636602 CHST8Q9H2A9 424 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 GPR35Q9HC97 309 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 FBXO34Q9NWN3 711 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 LRFN1Q9P244 771 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 HECAQ9UBI9 543 aaPredicted RBP5.15□□□□□ -1.59
CLN5-212ENST00000636602 HDAC9Q9UKV0 1011 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 HDAC5Q9UQL6 1122 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 TMX2Q9Y320 296 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 PLEKHM1Q9Y4G2 1056 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 PNPLA7Q6ZV29 1317 aa5.15□□□□□ -1.59
CLN5-212ENST00000636602 A0A087WWL8 130 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 GOLGA6L3A6NEY3 463 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 TBKBP1A7MCY6 615 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 CLCA1A8K7I4 914 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 M0QYG6 137 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 PODXLO00592 558 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 HNRNPDLO14979 420 aaKnown RBP5.14□□□□□ -1.59
CLN5-212ENST00000636602 AGFG2O95081 481 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 ANXA1P04083 346 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 GALNT1Q10472 559 aaPredicted RBP5.14□□□□□ -1.59
CLN5-212ENST00000636602 UBXN2BQ14CS0 331 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 BMT2Q1RMZ1 405 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 ATXN7L2Q5T6C5 722 aaPredicted RBP5.14□□□□□ -1.59
CLN5-212ENST00000636602 SYCE2Q6PIF2 218 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 CACNA2D3Q8IZS8 1091 aa5.14□□□□□ -1.59
CLN5-212ENST00000636602 RNF169Q8NCN4 708 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms