RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	GABRQ	Q9UN88	632 aa		15.02	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CAPN6	Q9Y6Q1	641 aa		15.02	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RASSF10	A6NK89	507 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	GAS2	O43903	313 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RRM1	P23921	792 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ACLY	P53396	1101 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RAB30	Q15771	203 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	HABP4	Q5JVS0	413 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SLC47A2	Q86VL8	602 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ASIC4	Q96FT7	647 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	EPAS1	Q99814	870 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ACP6	Q9NPH0	428 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	H2AFX	P16104	143 aa	Predicted RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FAXC	Q5TGI0	409 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	NYAP1	Q6ZVC0	841 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DCP1B	Q8IZD4	617 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	LENG1	Q96BZ8	264 aa	Predicted RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RANBP17	Q9H2T7	1088 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	LSM7	Q9UK45	103 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	UBA6	A0AVT1	1052 aa	Predicted RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SELP	P16109	830 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PMS2	P54278	862 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PRAME	P78395	509 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ACTN3	Q08043	901 aa	Predicted RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	NSUN2	Q08J23	767 aa	Known RBP eCLIP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ZNF235	Q14590	738 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MTFR1	Q15390	333 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SV2C	Q496J9	727 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FAM133B	Q5BKY9	247 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TATDN1	Q6P1N9	297 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RBM43	Q6ZSC3	357 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MAML1	Q92585	1016 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ELAC2	Q9BQ52	826 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	IKZF4	Q9H2S9	585 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SYNPO2	Q9UMS6	1093 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	JADE1	Q6IE81	842 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CCNYL1	Q8N7R7	359 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SPATA18	Q8TC71	538 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SLC5A5	Q92911	643 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TTC1	Q99614	292 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TRIM56	Q9BRZ2	755 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DDIT4	Q9NX09	232 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DONSON	Q9NYP3	566 aa		15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DBR1	Q9UK59	544 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DIS3	Q9Y2L1	958 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-238	ENST00000635997	APOL1	O14791	398 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	AP1G2	O75843	785 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FAM200B	P0CF97	657 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	GLE1	Q53GS7	698 aa	Known RBP	15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	LDLRAD1	Q5T700	205 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ZNF449	Q6P9G9	518 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CCDC197	Q8NCU1	140 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DUSP9	Q99956	384 aa	Known RBP	15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CISH	Q9NSE2	258 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ARHGAP20	Q9P2F6	1191 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	NRCAM	Q92823	1304 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CNTRL	Q7Z7A1	2325 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	COPE	O14579	308 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PARN	O95453	639 aa	Known RBP	15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CALCA	P01258	141 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CYBB	P04839	570 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KRT10	P13645	584 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CYP11B1	P15538	503 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ATXN3	P54252	364 aa	Predicted RBP	15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TMPRSS15	P98073	1019 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	AMPD2	Q01433	879 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	C6orf118	Q5T5N4	469 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	AGR3	Q8TD06	166 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ZNF384	Q8TF68	577 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ATG4A	Q8WYN0	398 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MTMR9	Q96QG7	549 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	GPATCH2L	Q9NWQ4	482 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ZNF446	Q9NWS9	450 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FARP1	Q9Y4F1	1045 aa	Predicted RBP	15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CYB561D2	O14569	222 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	BRAF	P15056	766 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	NCF2	P19878	526 aa	Predicted RBP	15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	NR1H3	Q13133	447 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PCSK7	Q16549	785 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	AAK1	Q2M2I8	961 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CST9	Q5W186	159 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ALS2CL	Q60I27	953 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SH3BP5L	Q7L8J4	393 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ARHGAP24	Q8N264	748 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ATL2	Q8NHH9	583 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ARHGAP39	Q9C0H5	1083 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	WDR35	Q9P2L0	1181 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CDY2A	Q9Y6F7	541 aa		15	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CEP290	O15078	2479 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997		A0A0G2JND7	137 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MAP3K13	O43283	966 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	OR2W6P	Q8NHA6	318 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KAT5	Q92993	513 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	HVCN1	Q96D96	273 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	OLFML3	Q9NRN5	406 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ANKRD63	C9JTQ0	380 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SPAG7	O75391	227 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	S100B	P04271	92 aa	Predicted RBP	14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KIT	P10721	976 aa		14.99	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms