RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 ANKRD44Q8N8A2 993 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 AGBL3Q8NEM8 1001 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 REPS2Q8NFH8 660 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 IFI44Q8TCB0 444 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 KAZALD1Q96I82 304 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 SAMD11Q96NU1 681 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 GLIS2Q9BZE0 524 aaPredicted RBP8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 API5Q9BZZ5 524 aaKnown RBP8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 COA1Q9GZY4 146 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 MEGF9Q9H1U4 602 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 MANSC1Q9H8J5 431 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 LANCL2Q9NS86 450 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 ABT1Q9ULW3 272 aaKnown RBP8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 ATRNL1Q5VV63 1379 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 AKAP11Q9UKA4 1901 aa8.35□□□□□ -1.07
SMARCA2-239ENST00000635388 SNAP23O00161 211 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 B3GALT2O43825 422 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 PLIN1O60240 522 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 CAND2O75155 1236 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 UBXN7O94888 489 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 UBTFL1P0CB47 393 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 PCSK1P29120 753 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 CASRP41180 1078 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 MAP2K6P52564 334 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 RIN1Q13671 783 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 KRT40Q6A162 431 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 PPP4R3AQ6IN85 833 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 GPR135Q8IZ08 494 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 CMTM4Q8IZR5 234 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 LGI4Q8N135 537 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 RGMAQ96B86 450 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 NEIL1Q96FI4 390 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 CGRRF1Q99675 332 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 DPYSL5Q9BPU6 564 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 USP44Q9H0E7 712 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 LDAHQ9H6V9 325 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 ARNT2Q9HBZ2 717 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 IL23AQ9NPF7 189 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 GGA3Q9NZ52 723 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 PUF60Q9UHX1 559 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 OAZ3Q9UMX2 235 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 DUSP10Q9Y6W6 482 aa8.34□□□□□ -1.07
SMARCA2-239ENST00000635388 FRMPD2Q68DX3 1309 aaPredicted RBP8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 ZBED9Q6R2W3 1325 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 MYO3BQ8WXR4 1341 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 PAPPA2Q9BXP8 1791 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 LRRC14BA6NHZ5 514 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 CELF2O95319 508 aaKnown RBP8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 FPR1P21462 350 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 EPHB4P54760 987 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 ZNF280AP59817 542 aaPredicted RBP8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 RAC3P60763 192 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 MTM1Q13496 603 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 DACT2Q5SW24 774 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 STRIP1Q5VSL9 837 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 C15orf52Q6ZUT6 534 aaKnown RBP8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 ZNF572Q7Z3I7 529 aaPredicted RBP8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 ZNF804AQ7Z570 1209 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 PLEKHH3Q7Z736 793 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 TTC7BQ86TV6 843 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 DRC7Q8IY82 874 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 FBXO18Q8NFZ0 1043 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 CCHCR1Q8TD31 782 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 CYFIP2Q96F07 1278 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 KCNC2Q96PR1 638 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 UHRF1Q96T88 793 aaPredicted RBP8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 MXD3Q9BW11 206 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 PUS3Q9BZE2 481 aaKnown RBP8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 SEC61A2Q9H9S3 476 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 TDP1Q9NUW8 608 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 PGAP2Q9UHJ9 254 aa8.33□□□□□ -1.08
SMARCA2-239ENST00000635388 ASTN2O75129 1339 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 MROH5Q6ZUA9 1318 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 SLC16A6O15403 523 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 ALOX15P16050 662 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 PER3P56645 1201 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 PPP2CBP62714 309 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 PPP2CAP67775 309 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 UBE4AQ14139 1066 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 MAP9Q49MG5 647 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 LRRC24Q50LG9 513 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 TTLL5Q6EMB2 1281 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 LCNL1Q6ZST4 164 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 CAMKK1Q8N5S9 505 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 SHCBP1Q8NEM2 672 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 MDM1Q8TC05 714 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 CASKIN2Q8WXE0 1202 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 DCPSQ96C86 337 aaKnown RBP8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 CEP95Q96GE4 821 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 KCNH6Q9H252 994 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 TMEM60Q9H2L4 133 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 MSL2Q9HCI7 577 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 CD209Q9NNX6 404 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 MYOZ2Q9NPC6 264 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 AJAP1Q9UKB5 411 aaPredicted RBP8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 AK9Q5TCS8 1911 aa8.32□□□□□ -1.08
SMARCA2-239ENST00000635388 ADM5C9JUS6 153 aa8.31□□□□□ -1.08
SMARCA2-239ENST00000635388 FAM227AF5H4B4 570 aa8.31□□□□□ -1.08
SMARCA2-239ENST00000635388 TPP1O14773 563 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms