RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 CINPQ9BW66 212 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 A8MXQ7 604 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 NBPF26B4DH59 902 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PSMD14O00487 310 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 ZNF512Q96ME7 567 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 COQ7Q99807 217 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 SPASTQ9UBP0 616 aa13.72□□□□□ -0.21
SYNGAP1-208ENST00000629380 PSMC3P17980 439 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 ATP6V1C1P21283 382 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 HARS2P49590 506 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 VMP1Q96GC9 406 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 MAML3Q96JK9 1138 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 CENPXA8MT69 81 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 C12orf60Q5U649 245 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 KRT73Q86Y46 540 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 C3orf20Q8ND61 904 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 OSBPL6Q9BZF3 934 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 HPS5Q9UPZ3 1129 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 EIF3LQ9Y262 564 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 SPATA31A5Q5VU36 1347 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 SPATA31A7Q8IWB4 1347 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 EEF2KO00418 725 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 PPP2R1BP30154 601 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 YWHAZP63104 245 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 DNAJC9Q8WXX5 260 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 SERPINB12Q96P63 405 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■■■■□ 22.8
SYNGAP1-208ENST00000629380 ECSITQ9BQ95 431 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 PHACTR1Q9C0D0 580 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 PCMTD2Q9NV79 361 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 PPRC1Q5VV67 1664 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 CD163L1Q9NR16 1453 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 INAQ16352 499 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 CAND2O75155 1236 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 CETPP11597 493 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 RBP5P82980 135 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 TCEAL5Q5H9L2 206 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 RNF25Q96BH1 459 aaPredicted RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 EDC3Q96F86 508 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
SYNGAP1-208ENST00000629380 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 MOCS2O96007 188 aaPredicted RBP13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 USP11P51784 963 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 LPAR1Q92633 364 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 CASP10Q92851 521 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 EMSYQ7Z589 1322 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 ENO3P13929 434 aaPredicted RBP13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 HPGDP15428 266 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 SKP1P63208 163 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 GPR63Q9BZJ6 419 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 F8W810 466 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 ERVK-10P10266 1014 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 CLEC16AQ2KHT3 1053 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 AGBL2Q5U5Z8 902 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 ERAP2Q6P179 960 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZNF589Q86UQ0 364 aaPredicted RBP13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 RSAD1Q9HA92 442 aa13.71□□□□□ -0.22
SYNGAP1-208ENST00000629380 RPS7P62081 194 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 TAF1CQ15572 869 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 WWOXQ9NZC7 414 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 PAK5Q9P286 719 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 ERN1O75460 977 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 UBE2OQ9C0C9 1292 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 IPPQ9Y573 584 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 CPDO75976 1380 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 POTEMA6NI47 508 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 PTPN12Q05209 780 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 AAASQ9NRG9 546 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 TRIP10Q15642 601 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 SLC30A1Q9Y6M5 507 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 TRPM8Q7Z2W7 1104 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 TRAPPC11Q7Z392 1133 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 CENPTQ96BT3 561 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 COPS7BQ9H9Q2 264 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 CNTNAP4Q9C0A0 1308 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 TRIM25Q14258 630 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 GRM4Q14833 912 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 RNASE11Q8TAA1 199 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 A0A1W2PQC6 194 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 RNASEH1O60930 286 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 CCDC130P13994 396 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 NFIAQ12857 509 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 SPATA18Q8TC71 538 aa13.7□□□□□ -0.22
SYNGAP1-208ENST00000629380 GLMNQ92990 594 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms