RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 C2orf71A6NGG8 1288 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 C1RP00736 705 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 GYPCP04921 128 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 TRIM21P19474 475 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 POU3F3P20264 500 aaPredicted RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 IRS1P35568 1242 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 GNL1P36915 607 aaPredicted RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 NDUFV1P49821 464 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 MRE11P49959 708 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 NDST1P52848 882 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 POLR2FP61218 127 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 TRIM14Q14142 442 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 BMS1Q14692 1282 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 ARID5BQ14865 1188 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 PTPN21Q16825 1174 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 PTPROQ16827 1216 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 CTXN3Q4LDR2 81 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 INTS6LQ5JSJ4 861 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZNF697Q5TEC3 545 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 KIAA1841Q6NSI8 718 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 PRSS55Q6UWB4 352 aaPredicted RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 CEP57Q86XR8 500 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 FAM71AQ8IYT1 594 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 CRYBG2Q8N1P7 616 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 THEM5Q8N1Q8 247 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 MRPL43Q8N983 215 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 MRPL38Q96DV4 380 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 PCMTD1Q96MG8 357 aaPredicted RBP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 TWNKQ96RR1 684 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 CLSTN3Q9BQT9 956 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZCWPW1Q9H0M4 648 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 SNX25Q9H3E2 840 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 ENTPD7Q9NQZ7 604 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 CDH9Q9ULB4 789 aa10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 HIDE1A8MVS5 230 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 A8MXQ7 604 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 HCRTO43612 131 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 PAEPP09466 180 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 CD58P19256 250 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 LMO2P25791 158 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 RAD23BP54727 409 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 TSPY1Q01534 308 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 SMARCB1Q12824 385 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 TBX2Q13207 712 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 RAB33AQ14088 237 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 DRAP1Q14919 205 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 GRIN2CQ14957 1233 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 PLPP4Q5VZY2 271 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 FAM171BQ6P995 826 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 RSPO2Q6UXX9 243 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 TMC7Q7Z402 723 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 FMNL3Q8IVF7 1028 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 SLC4A11Q8NBS3 891 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 B3GALNT2Q8NCR0 500 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 OR6B3Q8NGW1 331 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 AUTS2Q8WXX7 1259 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 TMEM176AQ96HP8 235 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 TNIP3Q96KP6 325 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 SYT15Q9BQS2 421 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 NT5C1AQ9BXI3 368 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 ELOVL4Q9GZR5 314 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 DPEP3Q9H4B8 488 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 CAPN11Q9UMQ6 739 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 CDY1Q9Y6F8 540 aa10.49□□□□□ -0.73
SOX2-OT-249ENST00000628810 WDR27A2RRH5 827 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 RNF225M0QZC1 329 aaPredicted RBP10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 FOXN3O00409 490 aaPredicted RBP10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 C2CD2LO14523 706 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 TEX28O15482 410 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 ADAM12O43184 909 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 ABLIM3O94929 683 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 ADCY5O95622 1261 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 CXCL14O95715 111 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 CNPP09543 421 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 SOX5P35711 763 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZBED6P86452 979 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 ROR1Q01973 937 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 GPR17Q13304 367 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 RAPGEF1Q13905 1077 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 MAPRE1Q15691 268 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 MEA1Q16626 185 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 ARHGAP44Q17R89 818 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 TPGS2Q68CL5 300 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 TMEM270Q6UE05 265 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 CACNA2D4Q7Z3S7 1137 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 DCP1BQ8IZD4 617 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 MYCBPAPQ8TBZ2 947 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 C2orf15Q8WU43 125 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 KLHL5Q96PQ7 755 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 TMEM209Q96SK2 561 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 EMILIN2Q9BXX0 1053 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 DNAI2Q9GZS0 605 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 NUCKS1Q9H1E3 243 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 NLRC4Q9NPP4 1024 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms