RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-208ENST00000628734 RUNDC1Q96C34 613 aa4.3□□□□□ -1.72
UBE2A-208ENST00000628734 CCDC34Q96HJ3 373 aa4.3□□□□□ -1.72
UBE2A-208ENST00000628734 C7orf25Q9BPX7 421 aa4.3□□□□□ -1.72
UBE2A-208ENST00000628734 BRINP2Q9C0B6 783 aa4.3□□□□□ -1.72
UBE2A-208ENST00000628734 RWDD1Q9H446 243 aaPredicted RBP4.3□□□□□ -1.72
UBE2A-208ENST00000628734 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
UBE2A-208ENST00000628734 ACAD8Q9UKU7 415 aa4.3□□□□□ -1.72
UBE2A-208ENST00000628734 PRAMEF33A0A0G2JMD5 474 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 CCDC196A0A1B0GTZ2 297 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 CCDC151A5D8V7 595 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 WIPF3A6NGB9 483 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 KIAA0391O15091 583 aaKnown RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 PRAMEF10O60809 474 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 HSP90AB1P08238 724 aaKnown RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 XBP1P17861 261 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 STIP1P31948 543 aaKnown RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 KLF1Q13351 362 aaPredicted RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 DCTN1Q14203 1278 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 SF3B3Q15393 1217 aaKnown RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 ZSCAN26Q16670 478 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 CCDC93Q567U6 631 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 SH2D3CQ8N5H7 860 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 TBC1D15Q8TC07 691 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 COG1Q8WTW3 980 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 JDP2Q8WYK2 163 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 FRAT1Q92837 279 aaPredicted RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 CENPTQ96BT3 561 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 SARAFQ96BY9 339 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 MPP4Q96JB8 637 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 TIGD1Q96MW7 591 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 TLR10Q9BXR5 811 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 PCDH12Q9NPG4 1184 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 KMT5AQ9NQR1 393 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 INTS13Q9NVM9 706 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 DDX56Q9NY93 547 aaKnown RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 HOXC10Q9NYD6 342 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
UBE2A-208ENST00000628734 IP6K2Q9UHH9 426 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 SUFUQ9UMX1 484 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 DNM3Q9UQ16 869 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 ITM2BQ9Y287 266 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 NEU2Q9Y3R4 380 aa4.29□□□□□ -1.72
UBE2A-208ENST00000628734 SHTN1A0MZ66 631 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CYSRT1A8MQ03 144 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 BOLA2-SMG1P6H3BVE0 249 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 YY2O15391 372 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CCDC159P0C7I6 412 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 RPL17P18621 184 aaKnown RBP4.28□□□□□ -1.72
UBE2A-208ENST00000628734 ZNF131P52739 623 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 MAPK10P53779 464 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CDC42EP1Q00587 391 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CREMQ03060 361 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 MECOMQ03112 1051 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 TRDNQ13061 729 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 TARDBPQ13148 414 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBE2A-208ENST00000628734 ARMC3Q5W041 872 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 TMPRSS9Q7Z410 1059 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CLNKQ7Z7G1 428 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CCDC89Q8N998 374 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 FAM184AQ8NB25 1140 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 TDRD7Q8NHU6 1098 aaKnown RBP4.28□□□□□ -1.72
UBE2A-208ENST00000628734 IFI44Q8TCB0 444 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 NEK9Q8TD19 979 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 VMP1Q96GC9 406 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 SLC39A13Q96H72 371 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CDHR1Q96JP9 859 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 SLC2A13Q96QE2 648 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 MPHOSPH6Q99547 160 aaKnown RBP4.28□□□□□ -1.72
UBE2A-208ENST00000628734 MMTAG2Q9BU76 263 aaKnown RBP4.28□□□□□ -1.72
UBE2A-208ENST00000628734 C1QTNF7Q9BXJ2 289 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 IQCGQ9H095 443 aaKnown RBP4.28□□□□□ -1.72
UBE2A-208ENST00000628734 ASB6Q9NWX5 421 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 MKS1Q9NXB0 559 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 TMOD4Q9NZQ9 345 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 CTTNBP2NLQ9P2B4 639 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 MAFFQ9ULX9 164 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 LZTS1Q9Y250 596 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 KIF3AQ9Y496 699 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBE2A-208ENST00000628734 IKBKGQ9Y6K9 419 aa4.28□□□□□ -1.72
UBE2A-208ENST00000628734 PHLDB1Q86UU1 1377 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 TMCO5BA8MYB1 307 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 SGTAO43765 313 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 CAND2O75155 1236 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 RNASEH2AO75792 299 aaKnown RBP4.27□□□□□ -1.73
UBE2A-208ENST00000628734 HOXD10P28358 340 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 GRIA3P42263 894 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 RIPK4P57078 832 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 RPS7P62081 194 aaKnown RBP4.27□□□□□ -1.73
UBE2A-208ENST00000628734 SIM2Q14190 667 aaPredicted RBP4.27□□□□□ -1.73
UBE2A-208ENST00000628734 INAVAQ3KP66 663 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
UBE2A-208ENST00000628734 JAKMIP3Q5VZ66 844 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 PDXDC1Q6P996 788 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.27□□□□□ -1.73
UBE2A-208ENST00000628734 ZNF788Q6ZQV5 615 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 PEG10Q86TG7 708 aaKnown RBP4.27□□□□□ -1.73
UBE2A-208ENST00000628734 TRIM74Q86UV6 250 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 TRIM73Q86UV7 250 aa4.27□□□□□ -1.73
UBE2A-208ENST00000628734 SUGP1Q8IWZ8 645 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms