RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 ARID5AQ03989 594 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 GOLGA8FQ08AF8 430 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 GOLGA8DPQ0D2H9 430 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 TBX2Q13207 712 aaPredicted RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 MRPL58Q14197 206 aaKnown RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 SMC1AQ14683 1233 aaKnown RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 BMS1Q14692 1282 aaKnown RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 PTPN14Q15678 1187 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 GPR153Q6NV75 609 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 RSPO2Q6UXX9 243 aaPredicted RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 GLYCTKQ8IVS8 523 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 MICAL1Q8TDZ2 1067 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 MARVELD3Q96A59 401 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 TMEM176AQ96HP8 235 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 LRCH3Q96II8 777 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 TMEM209Q96SK2 561 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 LPIN3Q9BQK8 851 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 SYT15Q9BQS2 421 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 ACBD6Q9BR61 282 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 NT5C1AQ9BXI3 368 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 EDEM3Q9BZQ6 932 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 ELOVL4Q9GZR5 314 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 DNAI2Q9GZS0 605 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CDH9Q9ULB4 789 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CAPN11Q9UMQ6 739 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CNTN6Q9UQ52 1028 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 LUC7L2Q9Y383 392 aaKnown RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 PCDHGC5Q9Y5F6 944 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CDY1Q9Y6F8 540 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CDH23Q9H251 3354 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 TMEM265A0A087WTH1 108 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 C2orf71A6NGG8 1288 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 OR6C75A6NL08 312 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 HIDE1A8MVS5 230 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 GOLGA6L6A8MZA4 724 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 AKR1B15C9JRZ8 316 aaPredicted RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 FSCN2O14926 492 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CYP26A1O43174 497 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 TBC1D4O60343 1298 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 MFAP3LO75121 409 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ATP2C2O75185 946 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 SLC34A2O95436 690 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 PAEPP09466 180 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CPB1P15086 417 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CD19P15391 556 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 PTPN1P18031 435 aaKnown RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 GNA15P30679 374 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 OR1D2P34982 312 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CLCN1P35523 988 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 KRT9P35527 623 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 IRS1P35568 1242 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 NDUFV1P49821 464 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF132P52740 706 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ADKP55263 362 aaKnown RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ZBED6P86452 979 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CREMQ03060 361 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CAMK2BQ13554 666 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CAMK1Q14012 370 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ASIC2Q16515 512 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 SLC39A12Q504Y0 691 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 MDH1BQ5I0G3 518 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 INTS6LQ5JSJ4 861 aaKnown RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF697Q5TEC3 545 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 SFMBT2Q5VUG0 894 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 FAM71AQ8IYT1 594 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 DCP1BQ8IZD4 617 aaKnown RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 C12orf29Q8N999 325 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 SLC4A11Q8NBS3 891 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 B3GALNT2Q8NCR0 500 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 PTCD2Q8WV60 388 aaKnown RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 TNIP3Q96KP6 325 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 HEXIM2Q96MH2 286 aaKnown RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 CLSTN3Q9BQT9 956 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 EMILIN2Q9BXX0 1053 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 OXCT2Q9BYC2 517 aaPredicted RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ZCWPW1Q9H0M4 648 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 LMAN2LQ9H0V9 348 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 TTYH1Q9H313 450 aaPredicted RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 NGRNQ9NPE2 291 aaKnown RBP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 ACP6Q9NPH0 428 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.06□□□□□ -0.96
SGMS1-211ENST00000626236 FAM49BQ9NUQ9 324 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 IMPACTQ9P2X3 320 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 GTF3C4Q9UKN8 822 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 MYO6Q9UM54 1294 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 BACE2Q9Y5Z0 518 aa9.06□□□□□ -0.96
SGMS1-211ENST00000626236 MYBPHLA2RUH7 354 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 DPYSL4O14531 572 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 TEX28O15482 410 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 ADAM12O43184 909 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 THAP12O43422 761 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 LILRB3O75022 631 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 CNPP09543 421 aaKnown RBP9.05□□□□□ -0.96
SGMS1-211ENST00000626236 NUDT7P0C024 238 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 CCDC172P0C7W6 258 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 VDRP11473 427 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 CCDC130P13994 396 aa9.05□□□□□ -0.96
SGMS1-211ENST00000626236 FERP16591 822 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms