RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PI4K2AQ9BTU6 479 aa11.93□□□□□ -0.5
DDX41-218ENST00000625286 ASB7Q9H672 318 aa11.93□□□□□ -0.5
DDX41-218ENST00000625286 ABI2Q9NYB9 513 aaPredicted RBP11.93□□□□□ -0.5
DDX41-218ENST00000625286 AGO2Q9UKV8 859 aaKnown RBP11.93□□□□□ -0.5
DDX41-218ENST00000625286 C2CD2Q9Y426 696 aa11.93□□□□□ -0.5
DDX41-218ENST00000625286 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.93□□□□□ -0.5
DDX41-218ENST00000625286 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 RPP40O75818 363 aaKnown RBP11.92□□□□□ -0.5
DDX41-218ENST00000625286 PPP1R37O75864 691 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 EPN2O95208 641 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 ZNF806P0C7X5 589 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 TAF6P49848 677 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 DDR2Q16832 855 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 ST3GAL2Q16842 350 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 ZNF720Q7Z2F6 126 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 OSTM1Q86WC4 334 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 SPPL2BQ8TCT7 592 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 EPSTI1Q96J88 318 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 AK8Q96MA6 479 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 ST6GALNAC4Q9H4F1 302 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 THG1LQ9NWX6 298 aaKnown RBP11.92□□□□□ -0.5
DDX41-218ENST00000625286 DSEQ9UL01 958 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 WDFY3Q8IZQ1 3526 aa11.92□□□□□ -0.5
DDX41-218ENST00000625286 GON4LQ3T8J9 2241 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 KIAA1549LQ6ZVL6 1849 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 CCDC163A0A0D9SF12 145 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 DCLK1O15075 740 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 SLC26A4O43511 780 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 RNF40O75150 1001 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 PAX3P23760 479 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 ACAT1P24752 427 aaKnown RBP11.91□□□□□ -0.5
DDX41-218ENST00000625286 CYP2F1P24903 491 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 DDIT3P35638 169 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 UBA7P41226 1012 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 LIMK1P53667 647 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 VEPH1Q14D04 833 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 TCEAL6Q6IPX3 200 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 CACNA2D4Q7Z3S7 1137 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 MON1AQ86VX9 555 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 THEM5Q8N1Q8 247 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 PDCL2Q8N4E4 241 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 C1orf127Q8N9H9 656 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 C2orf15Q8WU43 125 aaKnown RBP11.91□□□□□ -0.5
DDX41-218ENST00000625286 TCEAL3Q969E4 200 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 ZC3H10Q96K80 434 aaKnown RBP11.91□□□□□ -0.5
DDX41-218ENST00000625286 FGFBP2Q9BYJ0 223 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
DDX41-218ENST00000625286 L1RE1Q9UN81 338 aa11.91□□□□□ -0.5
DDX41-218ENST00000625286 PRPF40AO75400 957 aaKnown RBP11.9□□□□□ -0.5
DDX41-218ENST00000625286 NEFLP07196 543 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 SCP2P22307 547 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 PMLP29590 882 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 GJA4P35212 333 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 AVPR1AP37288 418 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 CASP5P51878 434 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 ZXDBP98169 803 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 SMARCB1Q12824 385 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 GRSF1Q12849 480 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDX41-218ENST00000625286 PLK5Q496M5 336 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 STPG1Q5TH74 334 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 SLFN12LQ6IEE8 588 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 DYMQ7RTS9 669 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 METTL23Q86XA0 190 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 SFR1Q86XK3 245 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
DDX41-218ENST00000625286 DNAJC19Q96DA6 116 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 SAAL1Q96ER3 474 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 CALML4Q96GE6 196 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 LOXL4Q96JB6 756 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 HHIPQ96QV1 700 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 LINC00597Q9H2U6 94 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 GCNT4Q9P109 453 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 GTF3C4Q9UKN8 822 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 MAGED2Q9UNF1 606 aaPredicted RBP11.9□□□□□ -0.5
DDX41-218ENST00000625286 PCDHB5Q9Y5E4 795 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 AKAP13Q12802 2813 aa11.9□□□□□ -0.5
DDX41-218ENST00000625286 MYOFQ9NZM1 2061 aa11.9□□□□□ -0.51
DDX41-218ENST00000625286 PTPRDP23468 1912 aa11.9□□□□□ -0.51
DDX41-218ENST00000625286 NUP205Q92621 2012 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 SPEGQ15772 3267 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 MYMKA6NI61 221 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 ATP2C2O75185 946 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 NOL4O94818 638 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 KCNA4P22459 653 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 POLR2BP30876 1174 aaKnown RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 LONP1P36776 959 aaKnown RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 POU5F1Q01860 360 aaKnown RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 ZNF268Q14587 947 aaPredicted RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 PTPAQ15257 358 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 SF3A1Q15459 793 aaKnown RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 ZNF77Q15935 545 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 TAF12Q16514 161 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 GAB4Q2WGN9 574 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 AASDHQ4L235 1098 aaPredicted RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 DCP1BQ8IZD4 617 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms