RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 PHF21BQ96EK2 531 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SGSM3Q96HU1 749 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TMEM87BQ96K49 555 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 RACGAP1Q9H0H5 632 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SCUBE2Q9NQ36 999 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 KLHL28Q9NXS3 571 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 DDX43Q9NXZ2 648 aaKnown RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 STK39Q9UEW8 545 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 LEF1Q9UJU2 399 aaPredicted RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 ZNF850A8MQ14 1090 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 INO80B-WBP1J3KQ70 363 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 ATP8B1O43520 1251 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 RBMXL2O75526 392 aaKnown RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 WFS1O76024 890 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 UBXN7O94888 489 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SNAP29O95721 258 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 RD3LP0DJH9 198 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 PRKACGP22612 351 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 ANXA13P27216 316 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 RPL35P42766 123 aaKnown RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 MAN2A2P49641 1150 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 LRRC63Q05C16 580 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 LACTB2Q53H82 288 aaPredicted RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 PRPF39Q86UA1 669 aaKnown RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 LURAP1LQ8IV03 231 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 NEDD1Q8NHV4 660 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 IFI44Q8TCB0 444 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 CYGBQ8WWM9 190 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 PPP1R16AQ96I34 528 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 RMDN3Q96TC7 470 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SEPT5Q99719 369 aaPredicted RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 PANK2Q9BZ23 570 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TMEM138Q9NPI0 162 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 ETAA1Q9NY74 926 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 ZNF219Q9P2Y4 722 aaPredicted RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 PCSK1NQ9UHG2 260 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 CFL2Q9Y281 166 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 WDR37Q9Y2I8 494 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 PCDHGA8Q9Y5G5 932 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 C13orf42A0A1B0GVH6 325 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SAC3D1A6NKF1 404 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SRRM3A6NNA2 597 aaPredicted RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 A6NNZ2 444 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 WDR64B1ANS9 1081 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 INPP4BO15327 924 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 FOXP2O15409 715 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 PSTPIP1O43586 416 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 IFNA17P01571 189 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 ZCCHC18P0CG32 403 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 KCNJ5P48544 419 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 CCT8P50990 548 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 CDH11P55287 796 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SQLEQ14534 574 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TUBB8Q3ZCM7 444 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TRIQKQ629K1 86 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 ATG9BQ674R7 924 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 PRR5LQ6MZQ0 368 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 MSANTD2Q6P1R3 559 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TTC23LQ6PF05 361 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TTC33Q6PID6 262 aaPredicted RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 C16orf89Q6UX73 402 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TMEM17Q86X19 198 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 ZC3H7AQ8IWR0 971 aaKnown RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 CFAP206Q8IYR0 622 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TBC1D15Q8TC07 691 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 MRAPQ8TCY5 172 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 FAM193BQ96PV7 902 aaPredicted RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 S100A13Q99584 98 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 EPB41L5Q9HCM4 733 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 PRDM11Q9NQV5 511 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 DCAF16Q9NXF7 216 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 TAB2Q9NYJ8 693 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 PCDHA12Q9UN75 941 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 DNM3Q9UQ16 869 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 FNDC3AQ9Y2H6 1198 aaKnown RBP3.62□□□□□ -1.83
ATRX-212ENST00000623706 PCDHB9Q9Y5E1 797 aa3.62□□□□□ -1.83
ATRX-212ENST00000623706 SLC33A1O00400 549 aaPredicted RBP3.61□□□□□ -1.83
ATRX-212ENST00000623706 OIP5O43482 229 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 ZBTB14O43829 449 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 GATBO75879 557 aaKnown RBP3.61□□□□□ -1.83
ATRX-212ENST00000623706 CALM1P0DP23 149 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 CALM2P0DP24 149 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 CALM3P0DP25 149 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 GCH1P30793 250 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 NNTQ13423 1086 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 STARD3Q14849 445 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 DCST2Q5T1A1 773 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 PRAMEF17Q5VTA0 474 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 FBXO38Q6PIJ6 1188 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 DPPA2Q7Z7J5 298 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 LONP2Q86WA8 852 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 DZIP3Q86Y13 1208 aaKnown RBP3.61□□□□□ -1.83
ATRX-212ENST00000623706 C12orf56Q8IXR9 622 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 SNX19Q92543 992 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 KRT12Q99456 494 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 RBM42Q9BTD8 480 aaKnown RBP3.61□□□□□ -1.83
ATRX-212ENST00000623706 DCLK3Q9C098 648 aa3.61□□□□□ -1.83
ATRX-212ENST00000623706 BICC1Q9H694 974 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms