RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y RXFP3Q9NSD7 469 aa17.46■□□□□ 0.39
CD99-211ENST00000623253_PAR_Y BLOC1S4Q9NUP1 217 aa17.46■□□□□ 0.39
CD99-211ENST00000623253_PAR_Y NUP210Q8TEM1 1887 aaPredicted RBP17.46■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TRDMT1O14717 391 aaKnown RBP17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y EPN2O95208 641 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y F11P03951 625 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y HMGA1P17096 107 aaKnown RBP17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DDX6P26196 483 aaKnown RBP eCLIP17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y GJB2P29033 226 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y GALK1P51570 392 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TSPY1Q01534 308 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y N4BP2L1Q5TBK1 243 aaPredicted RBP17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y POMGNT1Q8WZA1 660 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y HHIPQ96QV1 700 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y IKZF4Q9H2S9 585 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y KIF9Q9HAQ2 790 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y FBRSL1Q9HCM7 1045 aaKnown RBP17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TMLHEQ9NVH6 421 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ANGPTL2Q9UKU9 493 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ACACBO00763 2458 aa17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TPRP12270 2363 aaKnown RBP17.45■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CCDC163A0A0D9SF12 145 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y RAP1GAPP47736 663 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y LIMK1P53667 647 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TFAMQ00059 246 aaKnown RBP17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y GRIN1Q05586 938 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y PSMD2Q13200 908 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y STPG1Q5TH74 334 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y MON1AQ86VX9 555 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y EFCAB13Q8IY85 973 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y KRI1Q8N9T8 703 aaKnown RBP17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CHFRQ96EP1 664 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ZNF560Q96MR9 790 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y FIZ1Q96SL8 496 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y P2RY13Q9BPV8 354 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TRPC7Q9HCX4 862 aa17.44■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y RALGAPA1Q6GYQ0 2036 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y KMT2BQ9UMN6 2715 aaPredicted RBP17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TSC2P49815 1807 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CSH1P0DML2 217 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CSH2P0DML3 217 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DRD1P21728 446 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y MPLP40238 635 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y PDGFRLQ15198 375 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y NFE2Q16621 373 aaPredicted RBP17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DDR2Q16832 855 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y NAIF1Q69YI7 327 aaPredicted RBP17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CRELD2Q6UXH1 353 aaPredicted RBP17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DYMQ7RTS9 669 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CAMKK1Q8N5S9 505 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y RIN3Q8TB24 985 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y EXOC4Q96A65 974 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TMX3Q96JJ7 454 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CCSER1Q9C0I3 900 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y AGAP1Q9UPQ3 857 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y STYXL1Q9Y6J8 313 aa17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y KIF26AQ9ULI4 1882 aaPredicted RBP17.43■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y AKAP3O75969 853 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y IL18RAPO95256 599 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ACAT1P24752 427 aaKnown RBP17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CYP2F1P24903 491 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y POLR2BP30876 1174 aaKnown RBP17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y GJA4P35212 333 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y LONP1P36776 959 aaKnown RBP17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y PNPLA4P41247 253 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y MTF1Q14872 753 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y SFR1Q86XK3 245 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CPA6Q8N4T0 437 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y RPLP0P6Q8NHW5 317 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CYP2S1Q96SQ9 504 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y FAM213AQ9BRX8 229 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DUS2Q9NX74 493 aaKnown RBP17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DDX43Q9NXZ2 648 aaKnown RBP17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y PCDHGA5Q9Y5G8 931 aa17.42■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ANK1P16157 1881 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TM4SF5O14894 197 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DCLK1O15075 740 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y HUS1O60921 280 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ITGB3P05106 788 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CKMP06732 381 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y DDIT3P35638 169 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y RPL10AP62906 217 aaKnown RBP17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y CREB5Q02930 508 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y POSTNQ15063 836 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ELF2Q15723 593 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y PLK5Q496M5 336 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y FBXO43Q4G163 708 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y RNF43Q68DV7 783 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TCEAL6Q6IPX3 200 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ZNF720Q7Z2F6 126 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y NT5DC4Q86YG4 428 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y PDCL2Q8N4E4 241 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y NOC3LQ8WTT2 800 aaKnown RBP17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y TCEAL3Q969E4 200 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ZC3H10Q96K80 434 aaKnown RBP17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ST6GALNAC4Q9H4F1 302 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y ECT2Q9H8V3 914 aa17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y MRPL44Q9H9J2 332 aaKnown RBP17.41■□□□□ 0.38
CD99-211ENST00000623253_PAR_Y VPS45Q9NRW7 570 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms