RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ACAT1P24752 427 aaKnown RBP13.19□□□□□ -0.3
CBWD3-218ENST00000622755 GABRR2P28476 465 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 EPHA5P54756 1037 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
CBWD3-218ENST00000622755 SLC5A9Q2M3M2 681 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 PRSS36Q5K4E3 855 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 FGF14Q92915 247 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 SMARCD2Q92925 531 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 KXD1Q9BQD3 176 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 SLC2A4RGQ9NR83 387 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 GTF3C4Q9UKN8 822 aa13.19□□□□□ -0.3
CBWD3-218ENST00000622755 A8MXQ7 604 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 GABRDO14764 452 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 CST3P01034 146 aaPredicted RBP13.18□□□□□ -0.3
CBWD3-218ENST00000622755 CASP4P49662 377 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 CLCN5P51795 746 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 MYL6P60660 151 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 UBE2HP62256 183 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 LRRC63Q05C16 580 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 CFAP221Q4G0U5 840 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 CXorf38Q8TB03 319 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 ZSCAN18Q8TBC5 510 aaPredicted RBP13.18□□□□□ -0.3
CBWD3-218ENST00000622755 GIPC2Q8TF65 315 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 DEPDC1BQ8WUY9 529 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
CBWD3-218ENST00000622755 FAM122AQ96E09 287 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 BRD9Q9H8M2 597 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 CA14Q9ULX7 337 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
CBWD3-218ENST00000622755 PCDHA5Q9Y5H7 936 aa13.18□□□□□ -0.3
CBWD3-218ENST00000622755 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 TRIM66O15016 1216 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 NARSO43776 548 aaKnown RBP13.17□□□□□ -0.3
CBWD3-218ENST00000622755 SOAT2O75908 522 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 PDGFRBP09619 1106 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 DDX6P26196 483 aaKnown RBP eCLIP13.17□□□□□ -0.3
CBWD3-218ENST00000622755 GRIK1P39086 918 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 CLDN10P78369 228 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 FKBP3Q00688 224 aaKnown RBP13.17□□□□□ -0.3
CBWD3-218ENST00000622755 TEAD2Q15562 447 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 ZACNQ401N2 412 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 COBLL1Q53SF7 1204 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 GPR158Q5T848 1215 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 TCERG1LQ5VWI1 586 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
CBWD3-218ENST00000622755 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-218ENST00000622755 LRRTM3Q86VH5 581 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 TTC9BQ8N6N2 239 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 IRF7Q92985 503 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 TCEAL4Q96EI5 215 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 ASB16Q96NS5 453 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 TRMT61BQ9BVS5 477 aaKnown RBP13.17□□□□□ -0.3
CBWD3-218ENST00000622755 CRISPLD1Q9H336 500 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 SMOC2Q9H3U7 446 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 VRTNQ9H8Y1 702 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 ARHGEF3Q9NR81 526 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 MUC3AQ02505 3323 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 DOCK6Q96HP0 2047 aa13.17□□□□□ -0.3
CBWD3-218ENST00000622755 VNN2O95498 520 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 C4BPAP04003 597 aaKnown RBP13.16□□□□□ -0.3
CBWD3-218ENST00000622755 PSMC3P17980 439 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 AVPR2P30518 371 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 GTF2H1P32780 548 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 AVPR1AP37288 418 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 PRCPP42785 496 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 MAGEA11P43364 429 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 PDE6CP51160 858 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
CBWD3-218ENST00000622755 PRKCQQ04759 706 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 SV2AQ7L0J3 742 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
CBWD3-218ENST00000622755 SHKBP1Q8TBC3 707 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 ZNF516Q92618 1163 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 DHTKD1Q96HY7 919 aaPredicted RBP13.16□□□□□ -0.3
CBWD3-218ENST00000622755 FAM84AQ96KN4 292 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 MED10Q9BTT4 135 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 ELOVL4Q9GZR5 314 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
CBWD3-218ENST00000622755 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
CBWD3-218ENST00000622755 TECTAO75443 2155 aa13.16□□□□□ -0.3
CBWD3-218ENST00000622755 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 ZNF263O14978 683 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 NCAM2O15394 837 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 SLC16A3O15427 465 aaKnown RBP13.15□□□□□ -0.3
CBWD3-218ENST00000622755 AKAP3O75969 853 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms