RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CCT7Q99832 543 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 GBA3Q9H227 469 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 ETNK1Q9HBU6 452 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 TSC22D4Q9Y3Q8 395 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 COL2A1P02458 1487 aaPredicted RBP13.09□□□□□ -0.31
LITAF-221ENST00000622633 A0A1W2PQ67 120 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 TBC1D12O60347 775 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
LITAF-221ENST00000622633 MMP13P45452 471 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 MTMR1Q13613 665 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 LRP8Q14114 963 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
LITAF-221ENST00000622633 GSTA3Q16772 222 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 MARK2Q7KZI7 788 aaKnown RBP13.09□□□□□ -0.31
LITAF-221ENST00000622633 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 CACTIN-AS1Q8N1I8 211 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 CASP10Q92851 521 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 MAELQ96JY0 434 aaKnown RBP13.09□□□□□ -0.31
LITAF-221ENST00000622633 CCDC134Q9H6E4 229 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 EURLQ9NYK6 297 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 PARP2Q9UGN5 583 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
LITAF-221ENST00000622633 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
LITAF-221ENST00000622633 CLDN3O15551 220 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 RIPK2O43353 540 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 KDM1AO60341 852 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 UNC5CO95185 931 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 APBA3O96018 575 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 S100A1P23297 94 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 CYP1B1Q16678 543 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 XKR9Q5GH70 373 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 LRRC8BQ6P9F7 803 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 RSBN1LQ6PCB5 846 aaPredicted RBP13.08□□□□□ -0.31
LITAF-221ENST00000622633 KLHL35Q6PF15 583 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 PHLDB2Q86SQ0 1253 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 SCAIQ8N9R8 606 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 FNDC8Q8TC99 324 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 HELQQ8TDG4 1101 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 TAS1R2Q8TE23 839 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 MORC4Q8TE76 937 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 TMEM174Q8WUU8 243 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.31
LITAF-221ENST00000622633 FAM84AQ96KN4 292 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 OLFM3Q96PB7 478 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 TAAR1Q96RJ0 339 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 MAK16Q9BXY0 300 aaKnown RBP13.08□□□□□ -0.31
LITAF-221ENST00000622633 DEFB129Q9H1M3 183 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 RXFP1Q9HBX9 757 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 STOML1Q9UBI4 398 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 DKK3Q9UBP4 350 aa13.08□□□□□ -0.31
LITAF-221ENST00000622633 CNOT7Q9UIV1 285 aaKnown RBP13.08□□□□□ -0.31
LITAF-221ENST00000622633 SCAF8Q9UPN6 1271 aaKnown RBP13.08□□□□□ -0.31
LITAF-221ENST00000622633 MAPK13O15264 365 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 ENTPD5O75356 428 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 MYCLP12524 364 aaPredicted RBP13.08□□□□□ -0.32
LITAF-221ENST00000622633 RXRGP48443 463 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 CDR2Q01850 454 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 CYLC2Q14093 348 aaPredicted RBP13.08□□□□□ -0.32
LITAF-221ENST00000622633 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
LITAF-221ENST00000622633 FAM209AQ5JX71 171 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 KRT39Q6A163 491 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 RNF207Q6ZRF8 634 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
LITAF-221ENST00000622633 ART4Q93070 314 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 HSPBAP1Q96EW2 488 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 CCDC113Q9H0I3 377 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 CCDC68Q9H2F9 335 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
LITAF-221ENST00000622633 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
LITAF-221ENST00000622633 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
LITAF-221ENST00000622633 LYPLA2O95372 231 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 RARGP13631 454 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 NCKAP1LP55160 1127 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 RELAQ04206 551 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 TBL3Q12788 808 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 DGKZQ13574 1117 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 WASHC2DQ5SRD0 308 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 NIPA1Q7RTP0 329 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 LRRC8CQ8TDW0 803 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 PRMT1Q99873 361 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 ST6GALNAC4Q9H4F1 302 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 DCLRE1BQ9H816 532 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 INTS9Q9NV88 658 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 GTF3C4Q9UKN8 822 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 PASKQ96RG2 1323 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 RASGRF2O14827 1237 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 PMM2O15305 246 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 STK10O94804 968 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 GJB6O95452 261 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms