RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NCAPGQ9BPX3 1015 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 XYLT2Q9H1B5 865 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 PTPRHQ9HD43 1115 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 ARHGEF3Q9NR81 526 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 KLHL11Q9NVR0 708 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 WDR35Q9P2L0 1181 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 MCM8Q9UJA3 840 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 CEP83Q9Y592 693 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 SNCAIPQ9Y6H5 919 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 PTPRFP10586 1907 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 PAPPA2Q9BXP8 1791 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 LRRD1A4D1F6 860 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 E7ESA3 106 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 MED7O43513 233 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 ATP5HO75947 161 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 IL18RAPO95256 599 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 TNNC2P02585 160 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 HARSP12081 509 aaKnown RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 CCNB1P14635 433 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 KDELR1P24390 212 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 ASPAP45381 313 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 SLC25A11Q02978 314 aaKnown RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 MGAT5Q09328 741 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 LAMTOR4Q0VGL1 99 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 TRPC3Q13507 836 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 ACAP1Q15027 740 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 PKN2Q16513 984 aaKnown RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 HADHQ16836 314 aaKnown RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZNF699Q32M78 642 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 WDR72Q3MJ13 1102 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 SPDYAQ5MJ70 313 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 ANGEL2Q5VTE6 544 aaKnown RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 TXNRD3NBQ6F5E7 133 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 MPZL3Q6UWV2 235 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 METTL7BQ6UX53 244 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 TSHZ1Q6ZSZ6 1077 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 PLPPR4Q7Z2D5 763 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZBTB33Q86T24 672 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 TBC1D1Q86TI0 1168 aaPredicted RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 PPIL6Q8IXY8 311 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 DHRS4Q9BTZ2 278 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 BCO2Q9BYV7 579 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 MTMR12Q9C0I1 747 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 FZD8Q9H461 694 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 MLXIPLQ9NP71 852 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 KLHL14Q9P2G3 628 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 TBK1Q9UHD2 729 aa10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.12□□□□□ -0.79
IGHV3-54-201ENST00000622166 MGAMO43451 1857 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 IGF2BP3O00425 579 aaKnown RBP eCLIP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ACKR2O00590 384 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 TYROBPO43914 113 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 EDF1O60869 148 aaKnown RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 WFS1O76024 890 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 EZRP15311 586 aaKnown RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 PSMA2P25787 234 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 PHBP35232 272 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 RFC1P35251 1148 aaPredicted RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 TCF7P36402 384 aaPredicted RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 GABRB2P47870 512 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ARL4CP56559 192 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 GPX6P59796 221 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 PDIA2Q13087 525 aaKnown RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 FASTKD3Q14CZ7 662 aaKnown RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 PDK4Q16654 411 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 MAPK6Q16659 721 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 PTPN20Q4JDL3 420 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZFYVE27Q5T4F4 411 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ECHDC2Q86YB7 292 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 FITM2Q8N6M3 262 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ARFGAP1Q8N6T3 406 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 NAT8LQ8N9F0 302 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ANKLE1Q8NAG6 615 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ATP11CQ8NB49 1132 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 CMASQ8NFW8 434 aaPredicted RBP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 JOSD2Q8TAC2 188 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ANKRD36BP1Q96IX9 119 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 RMDN2Q96LZ7 410 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 SMC6Q96SB8 1091 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 TCHPQ9BT92 498 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 PITPNM3Q9BZ71 974 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 VPS37BQ9H9H4 285 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 BTBD7Q9P203 1132 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 GJA3Q9Y6H8 435 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 USH1CQ9Y6N9 552 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZSWIM8A7E2V4 1837 aa10.11□□□□□ -0.79
IGHV3-54-201ENST00000622166 CLUHO75153 1309 aa10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZBTB42B2RXF5 422 aa10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 POC1B-GALNT4F8VUJ3 575 aa10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 SGK1O00141 431 aa10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 SOCS7O14512 581 aa10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 SPAG7O75391 227 aa10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 LRCH4O75427 683 aa10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 USP2O75604 605 aaPredicted RBP10.1□□□□□ -0.79
IGHV3-54-201ENST00000622166 ENDOD1O94919 500 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms