RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PTPN4P29074 926 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 RASSF2P50749 326 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 VCPP55072 806 aaKnown RBP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 MXRA7P84157 204 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 PTP4A2Q12974 167 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 DPH6Q7L8W6 267 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 VPS52Q8N1B4 723 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 RIBC1Q8N443 379 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 TTC25Q96NG3 672 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 TCHPQ9BT92 498 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 MANSC1Q9H8J5 431 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 TTLL13PA6NNM8 815 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 PIK3R2O00459 728 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 TROVE2P10155 538 aaKnown RBP eCLIP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 BGNP21810 368 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 LMNB2Q03252 620 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 TAF5Q15542 800 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 FAM71DQ8N9W8 422 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 WDR60Q8WVS4 1066 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 FAM151AQ8WW52 585 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 MCUR1Q96AQ8 359 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 RBM41Q96IZ5 413 aaKnown RBP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 WDR83Q9BRX9 315 aaKnown RBP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 ZNF395Q9H8N7 513 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 MARCOQ9UEW3 520 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 CORO1CQ9ULV4 474 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-211ENST00000622020 SCINQ9Y6U3 715 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 EXTL3O43909 919 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 LYPLA2O95372 231 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 RFC5P40937 340 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 OSTNP61366 133 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 SARNPP82979 210 aaKnown RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 CDCA2Q69YH5 1023 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 ZC3H18Q86VM9 953 aaKnown RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 MCF2L2Q86YR7 1114 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 INPP5DQ92835 1189 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 MSTO1Q9BUK6 570 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 NMRK1Q9NWW6 199 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 hCG_1818297A0A087WSY0 165 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 TMEM191CA6NGB0 347 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 SMIM24O75264 130 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 HAUS5O94927 633 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 LUC7L3O95232 432 aaKnown RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 TNFSF9P41273 254 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 JAK3P52333 1124 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 PRKCEQ02156 737 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 GRIK3Q13003 919 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 MORF4L2Q15014 288 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 TFDP3Q5H9I0 405 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 C15orf39Q6ZRI6 1047 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 ZNF677Q86XU0 584 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 IGDCC3Q8IVU1 814 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 LMNTD2Q8IXW0 634 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 RNF217Q8TC41 542 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 ASAP3Q8TDY4 903 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 RSAD2Q8WXG1 361 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 CPT1BQ92523 772 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 MECRQ9BV79 373 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 PXMP2Q9NR77 195 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 ANKEF1Q9NU02 776 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 FZD1Q9UP38 647 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 LRRC42Q9Y546 428 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 FAM237BA0A1B0GVD1 139 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 CAPN9O14815 690 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 EDN1P05305 212 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 ARFIP2P53365 341 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 INHBEP58166 350 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 SNRPFP62306 86 aaKnown RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 IRX1P78414 480 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 NCOA4Q13772 614 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 SMAD1Q15797 465 aaKnown RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 ACSBG2Q5FVE4 666 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 RNF220Q5VTB9 566 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 GPAT2Q6NUI2 795 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 C4orf50Q6ZRC1 276 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 RINLQ6ZS11 566 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 CDR2LQ86X02 465 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-211ENST00000622020 RELL1Q8IUW5 271 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 UNC45BQ8IWX7 931 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
NPHP4-211ENST00000622020 LPXNO60711 386 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 TMEM63AO94886 807 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 RFC1P35251 1148 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-211ENST00000622020 KRT76Q01546 638 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 OASLQ15646 514 aaKnown RBP16.55■□□□□ 0.24
NPHP4-211ENST00000622020 CTC1Q2NKJ3 1217 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 SNX30Q5VWJ9 437 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 CTAGE3PQ8IX95 158 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 HSPH1Q92598 858 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 TMEM120AQ9BXJ8 343 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 K7ERI5 159 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 C2CD2LO14523 706 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 MT-ND3P03897 115 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 CD19P15391 556 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 MMP8P22894 467 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 CDKN2BP42772 138 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms