RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 LACTB2Q53H82 288 aaPredicted RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 LMBRD2Q68DH5 695 aaPredicted RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 CCDC13Q8IYE1 715 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 FNBP1Q96RU3 617 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 HAPLN2Q9GZV7 340 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 AGO2Q9UKV8 859 aaKnown RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 CNTN6Q9UQ52 1028 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 NOD1Q9Y239 953 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 MBLAC1A4D2B0 266 aaPredicted RBP18.46■□□□□ 0.55
FAM3A-222ENST00000621967 TREHO43280 583 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 PSTPIP1O43586 416 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 CYP2C9P11712 490 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 TNNI1P19237 187 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 PIK3CAP42336 1068 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
FAM3A-222ENST00000621967 NOMO3P69849 1222 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 ZNF200P98182 395 aaPredicted RBP18.46■□□□□ 0.55
FAM3A-222ENST00000621967 HIC1Q14526 733 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 ICE2Q659A1 982 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 UHMK1Q8TAS1 419 aaKnown RBP18.46■□□□□ 0.55
FAM3A-222ENST00000621967 DIS3LQ8TF46 1054 aaKnown RBP18.46■□□□□ 0.55
FAM3A-222ENST00000621967 VCPIP1Q96JH7 1222 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 SEZ6LQ9BYH1 1024 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 ASIC3Q9UHC3 531 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 NEU2Q9Y3R4 380 aa18.46■□□□□ 0.55
FAM3A-222ENST00000621967 ARVCFO00192 962 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 ASAP2O43150 1006 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 ADAM17P78536 824 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 CAV1Q03135 178 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 STRN3Q13033 797 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 SNX1Q13596 522 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 CUL2Q13617 745 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 ANKRD20A8PQ5CZ79 823 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 COL13A1Q5TAT6 717 aaPredicted RBP18.45■□□□□ 0.54
FAM3A-222ENST00000621967 IER5Q5VY09 327 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 TAOK1Q7L7X3 1001 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 CCDC25Q86WR0 208 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 ATG4AQ8WYN0 398 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 FAM49AQ9H0Q0 323 aaPredicted RBP18.45■□□□□ 0.54
FAM3A-222ENST00000621967 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
FAM3A-222ENST00000621967 HOMER3Q9NSC5 361 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 INTS9Q9NV88 658 aaKnown RBP18.45■□□□□ 0.54
FAM3A-222ENST00000621967 AKT3Q9Y243 479 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 H0YHG0 523 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 GAS8O95995 478 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 CHKAP35790 457 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 NAMPTP43490 491 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 LLGL1Q15334 1064 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 LIN9Q5TKA1 542 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 SLFN12LQ6IEE8 588 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 SPOPLQ6IQ16 392 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 LLGL2Q6P1M3 1020 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 TAF2Q6P1X5 1199 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 PIGWQ7Z7B1 504 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 PHF13Q86YI8 300 aaPredicted RBP18.45■□□□□ 0.54
FAM3A-222ENST00000621967 ATL2Q8NHH9 583 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 ASAP3Q8TDY4 903 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 SERPINB12Q96P63 405 aa18.45■□□□□ 0.54
FAM3A-222ENST00000621967 DDX23Q9BUQ8 820 aaKnown RBP18.45■□□□□ 0.54
FAM3A-222ENST00000621967 ANK1P16157 1881 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 EVPLQ92817 2033 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 SMIM35A0A1B0GVV1 85 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 GLRA2P23416 452 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 SLCO1A2P46721 670 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 ACOT2P49753 483 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 ATN1P54259 1190 aaPredicted RBP18.44■□□□□ 0.54
FAM3A-222ENST00000621967 SPRED3Q2MJR0 410 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 PLEKHA7Q6IQ23 1121 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 PPP1R2P3Q6NXS1 205 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 EXOC3L1Q86VI1 746 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 KATNAL2Q8IYT4 538 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 SLC43A3Q8NBI5 491 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 CCT6BQ92526 530 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 PAWRQ96IZ0 340 aaKnown RBP18.44■□□□□ 0.54
FAM3A-222ENST00000621967 C11orf49Q9H6J7 331 aa18.44■□□□□ 0.54
FAM3A-222ENST00000621967 TRMT13Q9NUP7 481 aaKnown RBP18.44■□□□□ 0.54
FAM3A-222ENST00000621967 R3HDM2Q9Y2K5 976 aaKnown RBP18.44■□□□□ 0.54
FAM3A-222ENST00000621967 TRIP12Q14669 1992 aaPredicted RBP18.44■□□□□ 0.54
FAM3A-222ENST00000621967 TTC4O95801 387 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 LDHAP00338 332 aaKnown RBP18.43■□□□□ 0.54
FAM3A-222ENST00000621967 CFHP08603 1231 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 CLTAP09496 248 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 GHRP10912 638 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 COL6A1P12109 1028 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 ARL2P36404 184 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 ITGA8P53708 1063 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 MKRN4PQ13434 485 aaPredicted RBP18.43■□□□□ 0.54
FAM3A-222ENST00000621967 MAMLD1Q13495 774 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 MXD4Q14582 209 aaPredicted RBP18.43■□□□□ 0.54
FAM3A-222ENST00000621967 CNGA2Q16280 664 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 NECAB2Q7Z6G3 386 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 RHPN2Q8IUC4 686 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 RHOT1Q8IXI2 618 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 LINC01465Q8N7H1 131 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.43■□□□□ 0.54
FAM3A-222ENST00000621967 PRPF31Q8WWY3 499 aaKnown RBP18.43■□□□□ 0.54
FAM3A-222ENST00000621967 CGRRF1Q99675 332 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 TRAIPQ9BWF2 469 aa18.43■□□□□ 0.54
FAM3A-222ENST00000621967 KDM4CQ9H3R0 1056 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms