RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CDH19Q9H159 772 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 ANLNQ9NQW6 1124 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 CPA4Q9UI42 421 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 FRMD4BQ9Y2L6 1034 aa5.61□□□□□ -1.51
BRCA1-229ENST00000621897 THRAP3Q9Y2W1 955 aaKnown RBP5.61□□□□□ -1.51
BRCA1-229ENST00000621897 E2F8A0AVK6 867 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 PROP1O75360 226 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 MYBP10242 640 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 ZFXP17010 805 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-229ENST00000621897 NCLP19338 710 aaKnown RBP5.6□□□□□ -1.51
BRCA1-229ENST00000621897 GPD1P21695 349 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 KCNJ5P48544 419 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 TBCCQ15814 346 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 ZNF788Q6ZQV5 615 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 MRGPRX1Q96LB2 322 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 AIFM3Q96NN9 605 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 ACO2Q99798 780 aaKnown RBP5.6□□□□□ -1.51
BRCA1-229ENST00000621897 ALG8Q9BVK2 526 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 SARS2Q9NP81 518 aaKnown RBP5.6□□□□□ -1.51
BRCA1-229ENST00000621897 NMRK2Q9NPI5 230 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 ZIM2Q9NZV7 527 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 TNFRSF18Q9Y5U5 241 aa5.6□□□□□ -1.51
BRCA1-229ENST00000621897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.6□□□□□ -1.51
BRCA1-229ENST00000621897 A0A088AWK7 358 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 UBXN7O94888 489 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 TTLL1O95922 423 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 ERBB2P04626 1255 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 GRPP07492 148 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 EBLN1P0CF75 366 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 JUPP14923 745 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 HTR1BP28222 390 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 LILRA4P59901 499 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 LONRF3Q496Y0 759 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 EPM2AIP1Q7L775 607 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-229ENST00000621897 MAVSQ7Z434 540 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 DENND1CQ8IV53 801 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 SLC35G2Q8TBE7 412 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 MTFMTQ96DP5 389 aaKnown RBP5.59□□□□□ -1.51
BRCA1-229ENST00000621897 TAAR9Q96RI9 348 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 HAPLN3Q96S86 360 aa5.59□□□□□ -1.51
BRCA1-229ENST00000621897 P2RX7Q99572 595 aaKnown RBP5.59□□□□□ -1.51
BRCA1-229ENST00000621897 WIPF3A6NGB9 483 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 H3BML4 177 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 HSPA6P17066 643 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 DRD4P21917 467 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 CLCN2P51788 898 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 EPHB1P54762 984 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 LOXL3P58215 753 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 FGL2Q14314 439 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 SERTAD3Q9UJW9 196 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 SSX2IPQ9Y2D8 614 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 MED16Q9Y2X0 877 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 PLEKHM1Q9Y4G2 1056 aa5.58□□□□□ -1.52
BRCA1-229ENST00000621897 FNDC1Q4ZHG4 1894 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-229ENST00000621897 RFPL1O75677 317 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 ATXN1LP0C7T5 689 aaKnown RBP5.57□□□□□ -1.52
BRCA1-229ENST00000621897 NPR1P16066 1061 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 LIPAP38571 399 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 CCT8P50990 548 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 UCP3P55916 312 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 BMPR2Q13873 1038 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 IQCB1Q15051 598 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 ARHGAP40Q5TG30 622 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 ZBTB34Q8NCN2 500 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 DPF1Q92782 380 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 CAMKK2Q96RR4 588 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 SERTAD4Q9NUC0 356 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 XPR1Q9UBH6 696 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 WNT6Q9Y6F9 365 aa5.57□□□□□ -1.52
BRCA1-229ENST00000621897 SETD1BQ9UPS6 1966 aaKnown RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 AOX1Q06278 1338 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 MANSC4A6NHS7 340 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 CGB1A6NKQ9 187 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 GCOM1H8Y6P7 765 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 hCG_1984214I3L0E3 225 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 PRPF3O43395 683 aaKnown RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 PXNP49023 591 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 SLC11A2P49281 568 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 SOX10P56693 466 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 FOXF2Q12947 444 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 PLEKHG6Q3KR16 790 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 FAM153CQ494X1 144 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 ODR4Q5SWX8 454 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 ZKSCAN2Q63HK3 967 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 ICE2Q659A1 982 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 LAYNQ6UX15 382 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 ZNF551Q7Z340 670 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 DTX2Q86UW9 622 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 ATRIPQ8WXE1 791 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 NELL2Q99435 816 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 ARHGEF3Q9NR81 526 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 SERGEFQ9UGK8 458 aa5.56□□□□□ -1.52
BRCA1-229ENST00000621897 MRPS17Q9Y2R5 130 aaKnown RBP5.56□□□□□ -1.52
BRCA1-229ENST00000621897 VIPR2P41587 438 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 GTF2H3Q13889 308 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 LRRC41Q15345 812 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 AMOTQ4VCS5 1084 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 ZNF618Q5T7W0 954 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms