RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TOP6BLQ8N6T0 577 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 C3orf20Q8ND61 904 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 MCEEQ96PE7 176 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 CPXM1Q96SM3 734 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 NAP1L3Q99457 506 aaPredicted RBP22.7■■□□□ 1.22
SPAST-204ENST00000621856 LRRC1Q9BTT6 524 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 UBN1Q9NPG3 1134 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 CACNG4Q9UBN1 327 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 RAB21Q9UL25 225 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 TTC7AQ9ULT0 858 aaPredicted RBP22.7■■□□□ 1.22
SPAST-204ENST00000621856 TCRBV5S1A1TA0A578 114 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 KRIT1O00522 736 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 PODXLO00592 558 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 CYB561D2O14569 222 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 FGGP02679 453 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 GPD2P43304 727 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 RPL7AP62424 266 aaKnown RBP22.69■■□□□ 1.22
SPAST-204ENST00000621856 PDCLQ13371 301 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 BRD3Q15059 726 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 MTFR1Q15390 333 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 CLUL1Q15846 466 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 PPP1R26Q5T8A7 1209 aaPredicted RBP22.69■■□□□ 1.22
SPAST-204ENST00000621856 ECHDC2Q86YB7 292 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 IPO4Q8TEX9 1081 aaKnown RBP22.69■■□□□ 1.22
SPAST-204ENST00000621856 KRT12Q99456 494 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 AP1M1Q9BXS5 423 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 DPEP3Q9H4B8 488 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 PAK6Q9NQU5 681 aaPredicted RBP22.69■■□□□ 1.22
SPAST-204ENST00000621856 WDR35Q9P2L0 1181 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 HESX1Q9UBX0 185 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 TJP2Q9UDY2 1190 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 USTQ9Y2C2 406 aa22.69■■□□□ 1.22
SPAST-204ENST00000621856 TMEM191CA6NGB0 347 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 HCRTO43612 131 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 RWDD2BP57060 319 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 MBTPS1Q14703 1052 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 TMCO3Q6UWJ1 677 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 MTERF4Q7Z6M4 381 aaKnown RBP22.68■■□□□ 1.22
SPAST-204ENST00000621856 RNF208Q9H0X6 261 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 ST7Q9NRC1 585 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 LCMT1Q9UIC8 334 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 TMEM59LQ9UK28 342 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 INPP5FQ9Y2H2 1132 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 DNAH12Q6ZR08 3092 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 TDRD15B5MCY1 1934 aaKnown RBP22.68■■□□□ 1.22
SPAST-204ENST00000621856 CASTOR2A6NHX0 329 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 POMCP01189 267 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 ERBB2P04626 1255 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 CCL5P13501 91 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 WARSP23381 471 aaKnown RBP22.68■■□□□ 1.22
SPAST-204ENST00000621856 MCM3P25205 808 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 MAN1A1P33908 653 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 SSR1P43307 286 aaKnown RBP22.68■■□□□ 1.22
SPAST-204ENST00000621856 CDK7P50613 346 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 CLCNKBP51801 687 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 VSNL1P62760 191 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 LRRC8DQ7L1W4 858 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 LIMS2Q7Z4I7 341 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 KLHL7Q8IXQ5 586 aa22.68■■□□□ 1.22
SPAST-204ENST00000621856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.68■■□□□ 1.22
SPAST-204ENST00000621856 CCDC151A5D8V7 595 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 SELPP16109 830 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 LMO2P25791 158 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 RPL9P32969 192 aaKnown RBP22.67■■□□□ 1.22
SPAST-204ENST00000621856 BFSP2Q13515 415 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 ZNF268Q14587 947 aaPredicted RBP22.67■■□□□ 1.22
SPAST-204ENST00000621856 GLE1Q53GS7 698 aaKnown RBP22.67■■□□□ 1.22
SPAST-204ENST00000621856 PPP1R15BQ5SWA1 713 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 AADACL2Q6P093 401 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 XYLT1Q86Y38 959 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 RGS18Q9NS28 235 aa22.67■■□□□ 1.22
SPAST-204ENST00000621856 CCDC188H7C350 402 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 ERLIN1O75477 346 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 KRT3P12035 628 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 MRPS25P82663 173 aaKnown RBP22.66■■□□□ 1.22
SPAST-204ENST00000621856 ARHGAP17Q68EM7 881 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 WDR93Q6P2C0 686 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 DSTYKQ6XUX3 929 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 OSTM1Q86WC4 334 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 FAM126BQ8IXS8 530 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 CRYBG2Q8N1P7 616 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 TNIP3Q96KP6 325 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 SENP8Q96LD8 212 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 LPIN3Q9BQK8 851 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 PLVAPQ9BX97 442 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 MIS12Q9H081 205 aa22.66■■□□□ 1.22
SPAST-204ENST00000621856 SIGLEC16A6NMB1 481 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 PFKMP08237 780 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 SETSIPP0DME0 302 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 PYGMP11217 842 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 GABRB2P47870 512 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 GSCP56915 257 aaPredicted RBP22.65■■□□□ 1.22
SPAST-204ENST00000621856 GRIK3Q13003 919 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 DAB2IPQ5VWQ8 1189 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 WSCD1Q658N2 575 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 ADAT2Q7Z6V5 191 aaKnown RBP22.65■■□□□ 1.22
SPAST-204ENST00000621856 METTL5Q9NRN9 209 aaKnown RBP22.65■■□□□ 1.22
SPAST-204ENST00000621856 GOLGA6L10A0A0M3HER8 536 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 FAM163BP0C2L3 166 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 CCDC130P13994 396 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms