RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 TRAPPC3LQ5T215 181 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 GPATCH4Q5T3I0 446 aaKnown RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 THOC7Q6I9Y2 204 aaKnown RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 ATG16L2Q8NAA4 619 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 GIMAP8Q8ND71 665 aaPredicted RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 ELOVL6Q9H5J4 265 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 L1RE1Q9UN81 338 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 PSAPP07602 524 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 LCP1P13796 627 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 GALK1P51570 392 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CHN2P52757 468 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CCNIQ14094 377 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CHMP1BQ7LBR1 199 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 TRAPPC11Q7Z392 1133 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 RBBP8Q99708 897 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 POGZQ7Z3K3 1410 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 EFCAB10A6NFE3 127 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CBX3Q13185 183 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 ADSSL1Q8N142 457 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 C8orf4Q9NR00 106 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CCDC59Q9P031 241 aaKnown RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 SMIM31A0A1B0GVY4 71 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 SLC16A4O15374 487 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 KCNQ3O43525 872 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CDC40O60508 579 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■■■■ 31.7
CLTC-215ENST00000621829 ZNF682O95780 498 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 RPS7P62081 194 aaKnown RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 C1DQ13901 141 aaKnown RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 JADE3Q92613 823 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 SNX8Q9Y5X2 465 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 PSMD11O00231 422 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 BGNP21810 368 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 RALGDSQ12967 914 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CYP51A1Q16850 503 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 SMTNL2Q2TAL5 461 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 GADL1Q6ZQY3 521 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 IKBIPQ70UQ0 350 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 MCEEQ96PE7 176 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CTNNAL1Q9UBT7 734 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CHORDC1Q9UHD1 332 aaPredicted RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 PKP3Q9Y446 797 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 DGCR6Q14129 220 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 THNSL1Q8IYQ7 743 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 CACTIN-AS1Q8N1I8 211 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 SNX31Q8N9S9 440 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 EZH1Q92800 747 aaPredicted RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 PPCSQ9HAB8 311 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 OPLAHO14841 1288 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 PTPN7P35236 360 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 COILP38432 576 aaPredicted RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 ARPC4P59998 168 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 C16orf62Q7Z3J2 963 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 KCTD14Q9BQ13 255 aaPredicted RBP12.05□□□□□ -0.48
CLTC-215ENST00000621829 SLC39A10Q9ULF5 831 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 PPP2R3BQ9Y5P8 575 aa12.05□□□□□ -0.48
CLTC-215ENST00000621829 MLNP12872 115 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 SLFN12LQ6IEE8 588 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 ZBTB1Q9Y2K1 713 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 KIF28PB7ZC32 967 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 MAGEA10P43363 369 aaPredicted RBP12.04□□□□□ -0.48
CLTC-215ENST00000621829 STARP49675 285 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 GANCQ8TET4 914 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 ERLEC1Q96DZ1 483 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 EHD4Q9H223 541 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 SRGNP10124 158 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 PTDSS1P48651 473 aaKnown RBP12.04□□□□□ -0.48
CLTC-215ENST00000621829 EXOSC10Q01780 885 aaKnown RBP12.04□□□□□ -0.48
CLTC-215ENST00000621829 TSPAN17Q96FV3 270 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 MAGED4Q96JG8 741 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 ANKZF1Q9H8Y5 726 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 CYP39A1Q9NYL5 469 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 DNAJC16Q9Y2G8 782 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 DUSP10Q9Y6W6 482 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 CBFA2T3O75081 653 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 SASH3O75995 380 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 CBX6O95503 412 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 S100A1P23297 94 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 LSM3P62310 102 aaKnown RBP12.04□□□□□ -0.48
CLTC-215ENST00000621829 MCL1Q07820 350 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 PCSK7Q16549 785 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 DSTYKQ6XUX3 929 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 UTP15Q8TED0 518 aaKnown RBP12.04□□□□□ -0.48
CLTC-215ENST00000621829 COPS7BQ9H9Q2 264 aaPredicted RBP12.04□□□□□ -0.48
CLTC-215ENST00000621829 PLGRKTQ9HBL7 147 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 CLCA2Q9UQC9 943 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 CLOCKO15516 846 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 COMTP21964 271 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 SGF29Q96ES7 293 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
CLTC-215ENST00000621829 KLHL1Q9NR64 748 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms