RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PODXLO00592 558 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 TSPAN3O60637 253 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 NCF2P19878 526 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 ETFBP38117 255 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 PCSK7Q16549 785 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 LONRF1Q17RB8 773 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 SPATA2LQ8IUW3 424 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 FIZ1Q96SL8 496 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC13A1Q9BZW2 595 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 PDGFDQ9GZP0 370 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 ERAP1Q9NZ08 941 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 IPO11Q9UI26 975 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 ARHGEF37A1IGU5 675 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 GOLGA8RI6L899 631 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PIK3CDO00329 1044 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 RTN2O75298 545 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 FDX1P10109 184 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 KITP10721 976 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 SCP2P22307 547 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 MXD4Q14582 209 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TCEA2Q15560 299 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 HIBCHQ6NVY1 386 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TTC27Q6P3X3 843 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ZNF467Q7Z7K2 595 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 CBWD2Q8IUF1 395 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 DAW1Q8N136 415 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TATDN2Q93075 761 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TMEM169Q96HH4 297 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 FAM84AQ96KN4 292 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PCDHB18PQ96TA0 734 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TRIM56Q9BRZ2 755 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 C2orf40Q9H1Z8 148 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ZDHHC18Q9NUE0 388 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 DMAC2Q9NW81 257 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TJP2Q9UDY2 1190 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PDHXO00330 501 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 GHRP10912 638 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 HSPA6P17066 643 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 MAP2K2P36507 400 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 SCTRP47872 440 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 MMP14P50281 582 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 OCRLQ01968 901 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 DCAF6Q58WW2 860 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ANKRD20A8PQ5CZ79 823 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 C6orf118Q5T5N4 469 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TRIM67Q6ZTA4 783 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 CEP128Q6ZU80 1094 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TAS2R42Q7RTR8 314 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 LCA5Q86VQ0 697 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 LRRC34Q8IZ02 419 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PRPF31Q8WWY3 499 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PPWD1Q96BP3 646 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 MXRA8Q9BRK3 442 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 FAM129AQ9BZQ8 928 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ADAMTSL1Q8N6G6 1762 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PGK1P00558 417 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 POMCP01189 267 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 IGFBP4P22692 258 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ADCY2Q08462 1091 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 GPS1Q13098 491 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TMEM132DQ14C87 1099 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 SNCBQ16143 134 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TRIM68Q6AZZ1 485 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ZDHHC24Q6UX98 284 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 RNF180Q86T96 592 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 SRRM1Q8IYB3 904 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 DHX38Q92620 1227 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TRIM11Q96F44 468 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 CPB2Q96IY4 423 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PGLYRP2Q96PD5 576 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TMEM117Q9H0C3 514 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ATXN2Q99700 1313 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 KLRG2A4D1S0 409 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ANKRD63C9JTQ0 380 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 KRT3P12035 628 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ITGB5P18084 799 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 DRD4P21917 467 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 GNL1P36915 607 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 COILP38432 576 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ALDH7A1P49419 539 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 DGKDQ16760 1214 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ERMARDQ5T6L9 678 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ATF7IP2Q5U623 682 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ZNF449Q6P9G9 518 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 BTNL9Q6UXG8 535 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 TMC7Q7Z402 723 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC13A5Q86YT5 568 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 YAF2Q8IY57 180 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 ATG4AQ8WYN0 398 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 N4BP2L2Q92802 583 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 IFT43Q96FT9 208 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 IFT122Q9HBG6 1241 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 NDFIP2Q9NV92 336 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 STAP1Q9ULZ2 295 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 PFASO15067 1338 aa8.68□□□□□ -1.02
PTPDC1-204ENST00000620992 CHUKO15111 745 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 ITGB3P05106 788 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 VIL1P09327 827 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms