RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 PRDM8Q9NQV8 689 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CHD2O14647 1828 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 HALP42357 657 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 BCAT1P54687 386 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 C1orf131Q8NDD1 294 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 ZDHHC15Q96MV8 337 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 C6orf203Q9P0P8 240 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 EIF3HO15372 352 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CCDC130P13994 396 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 STX3Q13277 289 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 ZSCAN26Q16670 478 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 BBS4Q96RK4 519 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 SCAF8Q9UPN6 1271 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 TCEAL5Q5H9L2 206 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 SPDYCQ5MJ68 293 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 GRAMD4Q6IC98 578 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CCT7Q99832 543 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 F5H6K3 240 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 RPSAP08865 295 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CDK16Q00536 496 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 KLRC3Q07444 240 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 KPNB1Q14974 876 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 PMF1Q6P1K2 205 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 TRMT11Q7Z4G4 463 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 B3GALNT2Q8NCR0 500 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 NOP53Q9NZM5 478 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 KIDINS220Q9ULH0 1771 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 NR3C1P04150 777 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CNGA3Q16281 694 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 AP1ARQ63HQ0 302 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 FAM45BPQ6NSW5 357 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 NIPA1Q7RTP0 329 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CNBD2Q96M20 576 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 VTA1Q9NP79 307 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CXCL11O14625 94 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 ADD1P35611 737 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 PTPRNQ16849 979 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 NELFCDQ8IXH7 590 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 BTBD6Q96KE9 485 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 PRKD2Q9BZL6 878 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 RPAP3Q9H6T3 665 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 MFAP3LO75121 409 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 TYK2P29597 1187 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 HTR7P34969 479 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 TMEM270Q6UE05 265 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 FAM151AQ8WW52 585 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 YME1L1Q96TA2 773 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 E2F3O00716 465 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 PLS3P13797 630 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 HIC1Q14526 733 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 TAF1CQ15572 869 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 DUS1LQ6P1R4 473 aaKnown RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ZSWIM5Q9P217 1185 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 C3P01024 1663 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 A8MXQ7 604 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 CYP2A7P20853 494 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 LINC00301Q8NCQ3 95 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 SLITRK2Q9H156 845 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 CENPXA8MT69 81 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 GHRP10912 638 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 NCF2P19878 526 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 SKIV2LQ15477 1246 aaKnown RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 KLHL26Q53HC5 615 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF564Q8TBZ8 553 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ADI1Q9BV57 179 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 NXF1Q9UBU9 619 aaKnown RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF232Q9UNY5 417 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 SMIM31A0A1B0GVY4 71 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 TOM1L1O75674 476 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 PNMA6AP0CW24 399 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 TTC23Q5W5X9 447 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 SZRD1Q7Z422 152 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 SAAL1Q96ER3 474 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 FAM167BQ9BTA0 163 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 XPO4Q9C0E2 1151 aaKnown RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ZMYND8Q9ULU4 1186 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 IRF6O14896 467 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF157P51786 506 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 PLOD1Q02809 727 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 GUCY2DQ02846 1103 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 CAMK2GQ13555 558 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 TAB1Q15750 504 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ATAD3BQ5T9A4 648 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 USP50Q70EL3 339 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 PEG10Q86TG7 708 aaKnown RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 SYNE4Q8N205 404 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ACOT12Q8WYK0 555 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 COPS7BQ9H9Q2 264 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 RNF146Q9NTX7 359 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 C15orf38-AP3S2A0A0A6YYH1 394 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 A1BGP04217 495 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 RBBP7Q16576 425 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 PRR5LQ6MZQ0 368 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 KCTD1Q719H9 257 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 ARPINQ7Z6K5 226 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 DDX53Q86TM3 631 aaKnown RBP7.49□□□□□ -1.21
CSMD2-210ENST00000619121 TUBGCP3Q96CW5 907 aa7.49□□□□□ -1.21
CSMD2-210ENST00000619121 MUC3BQ9H195 1237 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms