RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 H2AFZP0C0S5 128 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 PORP16435 677 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 CPA2P48052 419 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 CASP4P49662 377 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 BTKQ06187 659 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 SUPT20HL1Q3ZLR7 823 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 ODR4Q5SWX8 454 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 H2AFVQ71UI9 128 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 EPM2AIP1Q7L775 607 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 RASSF3Q86WH2 238 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 DIS3LQ8TF46 1054 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 RIT2Q99578 217 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 PARVGQ9HBI0 331 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 DOLKQ9UPQ8 538 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 UBIAD1Q9Y5Z9 338 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 SSC5DA1L4H1 1573 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 VILLO15195 856 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 LDHAP00338 332 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 DSG3P32926 999 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 CLCN2P51788 898 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 ACAD11Q709F0 780 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 MOB2Q70IA6 237 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 PRUNE1Q86TP1 453 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 SYCE1Q8N0S2 351 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 FAF1Q9UNN5 650 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 BTNL10A8MVZ5 291 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 HAUS5O94927 633 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 GSTT2P0CG29 244 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 GSTT2BP0CG30 244 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 CETPP11597 493 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 IDO1P14902 403 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 PTGIRP43119 386 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 MED21Q13503 144 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 KLHDC10Q6PID8 442 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 CFAP61Q8NHU2 1237 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 PARP2Q9UGN5 583 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 TRAF3IP3Q9Y228 551 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 GTF2H1P32780 548 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 HDAC4P56524 1084 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 TMED2Q15363 201 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 KYNUQ16719 465 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 UGCGQ16739 394 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 TREML2Q5T2D2 321 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 C1orf228Q6PIY5 440 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 B3GNT9Q6UX72 402 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 RAPH1Q70E73 1250 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 FNDC8Q8TC99 324 aa16.62■□□□□ 0.25
SEMA3B-214ENST00000619119 SPTLC1O15269 473 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 AKAP3O75969 853 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 ABCB4P21439 1286 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 CETN2P41208 172 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 GEMIN4P57678 1058 aaKnown RBP16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 IGBP1P78318 339 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 TTC27Q6P3X3 843 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 SLC2A7Q6PXP3 512 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 PADI6Q6TGC4 694 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 SULF1Q8IWU6 871 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 DQX1Q8TE96 717 aaKnown RBP16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 DCPSQ96C86 337 aaKnown RBP16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 CEP63Q96MT8 703 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 FAIMQ9NVQ4 179 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 UBAP1Q9NZ09 502 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 TELO2Q9Y4R8 837 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 PGM1P36871 562 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 KCNJ1P48048 391 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 THOC7Q6I9Y2 204 aaKnown RBP16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 SLFN11Q7Z7L1 901 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 TRIM59Q8IWR1 403 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 PRR11Q96HE9 360 aaPredicted RBP16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 AFG3L2Q9Y4W6 797 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 ASTN1O14525 1302 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 RASA4BC9J798 803 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 RASA4O43374 803 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 NR3C1P04150 777 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 NR3C2P08235 984 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 DRG2P55039 364 aaKnown RBP16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 KCNH2Q12809 1159 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 OVGP1Q12889 678 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 LLGL1Q15334 1064 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 CATSPERGQ6ZRH7 1159 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 SLC25A41Q8N5S1 370 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 TSC22D4Q9Y3Q8 395 aa16.61■□□□□ 0.25
SEMA3B-214ENST00000619119 FAM47DPA6NHR8 397 aa16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 DDX3YO15523 660 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 EDF1O60869 148 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 P4HBP07237 508 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 PCSK6P29122 969 aa16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 PLA2G4FQ68DD2 849 aa16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 PATL1Q86TB9 770 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 CCDC105Q8IYK2 499 aa16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 REPS2Q8NFH8 660 aa16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 DOCK1Q14185 1865 aa16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
SEMA3B-214ENST00000619119 PHF2O75151 1096 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms