RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 KIF9Q9HAQ2 790 aa12.99□□□□□ -0.33
COL4A2-210ENST00000617564 CPSF3Q9UKF6 684 aaKnown RBP12.99□□□□□ -0.33
COL4A2-210ENST00000617564 TBX20Q9UMR3 447 aa12.99□□□□□ -0.33
COL4A2-210ENST00000617564 GPSM3Q9Y4H4 160 aa12.99□□□□□ -0.33
COL4A2-210ENST00000617564 PCDHGA5Q9Y5G8 931 aa12.99□□□□□ -0.33
COL4A2-210ENST00000617564 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
COL4A2-210ENST00000617564 NAV2Q8IVL1 2488 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 ANO9A1A5B4 782 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 PIRO00625 290 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 AXIN1O15169 862 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 EXTL3O43909 919 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 RPP40O75818 363 aaKnown RBP12.98□□□□□ -0.33
COL4A2-210ENST00000617564 NFICP08651 508 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 ZNF131P52739 623 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 AMPD2Q01433 879 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 POU5F1Q01860 360 aaKnown RBP12.98□□□□□ -0.33
COL4A2-210ENST00000617564 TMEM132DQ14C87 1099 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 TAF12Q16514 161 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 ARSHQ5FYA8 562 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 RNF43Q68DV7 783 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 THEM5Q8N1Q8 247 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 EXOC4Q96A65 974 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 AK8Q96MA6 479 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 FAM83CQ9BQN1 747 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 REEP2Q9BRK0 252 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 MSTO1Q9BUK6 570 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 PARVGQ9HBI0 331 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 SLC8A2Q9UPR5 921 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 C2CD2Q9Y426 696 aa12.98□□□□□ -0.33
COL4A2-210ENST00000617564 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.98□□□□□ -0.33
COL4A2-210ENST00000617564 ITPR1Q14643 2758 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 NPHP3-ACAD11A0A0J9YXS1 232 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 VWA3AA6NCI4 1184 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
COL4A2-210ENST00000617564 TRDMT1O14717 391 aaKnown RBP12.97□□□□□ -0.33
COL4A2-210ENST00000617564 FAM13AO94988 1023 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 HAPLN1P10915 354 aaPredicted RBP12.97□□□□□ -0.33
COL4A2-210ENST00000617564 AVPR1AP37288 418 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 TAF6P49848 677 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 RUNX3Q13761 415 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 FSTL4Q6MZW2 842 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 PKN3Q6P5Z2 889 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 CMTM8Q8IZV2 173 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 CAMKK1Q8N5S9 505 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 BBC3Q96PG8 261 aaPredicted RBP12.97□□□□□ -0.33
COL4A2-210ENST00000617564 PLIN2Q99541 437 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 SLC46A2Q9BY10 475 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 HPS4Q9NQG7 708 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 GKN1Q9NS71 199 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
COL4A2-210ENST00000617564 AKAP13Q12802 2813 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 TRAK2O60296 914 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 CCDC192P0DO97 292 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 DRD1P21728 446 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 BFSP1Q12934 665 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 CUL4AQ13619 759 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 ZNF268Q14587 947 aaPredicted RBP12.96□□□□□ -0.33
COL4A2-210ENST00000617564 COL28A1Q2UY09 1125 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 FBXO43Q4G163 708 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 PLA2G2CQ5R387 149 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 SH3PXD2AQ5TCZ1 1133 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 SLC39A4Q6P5W5 647 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 DCP1BQ8IZD4 617 aaKnown RBP12.96□□□□□ -0.33
COL4A2-210ENST00000617564 MYCT1Q8N699 235 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 CALML4Q96GE6 196 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 ZC3H10Q96K80 434 aaKnown RBP12.96□□□□□ -0.33
COL4A2-210ENST00000617564 PYM1Q9BRP8 204 aaKnown RBP12.96□□□□□ -0.33
COL4A2-210ENST00000617564 SMG9Q9H0W8 520 aaKnown RBP12.96□□□□□ -0.33
COL4A2-210ENST00000617564 VPS45Q9NRW7 570 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 TDP1Q9NUW8 608 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 DACH1Q9UI36 760 aa12.96□□□□□ -0.33
COL4A2-210ENST00000617564 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 SPAG17Q6Q759 2223 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 CYB561D2O14569 222 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 TBCAO75347 108 aaKnown RBP12.95□□□□□ -0.34
COL4A2-210ENST00000617564 F11P03951 625 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 CSH1P0DML2 217 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 CSH2P0DML3 217 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 HOXC13P31276 330 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 MPLP40238 635 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 NLRP12P59046 1061 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 GTF2BQ00403 316 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 KARSQ15046 597 aaKnown RBP12.95□□□□□ -0.34
COL4A2-210ENST00000617564 PDGFRLQ15198 375 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 SV2CQ496J9 727 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 TMEM150AQ86TG1 271 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 KBTBD6Q86V97 674 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 NT5DC4Q86YG4 428 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 GLIS3Q8NEA6 775 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 GIPC2Q8TF65 315 aa12.95□□□□□ -0.34
COL4A2-210ENST00000617564 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
COL4A2-210ENST00000617564 MRPS31Q92665 395 aaKnown RBP12.95□□□□□ -0.34
COL4A2-210ENST00000617564 USP13Q92995 863 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms