RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 CENPEQ02224 2701 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.6
AP003900.1-202ENST00000616952 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 K7EQS6 105 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 ANP32CO43423 234 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 TRAPPC3O43617 180 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 NPTXRO95502 500 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 FOSP01100 380 aaPredicted RBP11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 MATKP42679 507 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 PLD1Q13393 1074 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 XKR3Q5GH77 459 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 USP49Q70CQ1 688 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 ALLCQ8N6M5 410 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 EXD3Q8N9H8 876 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 ENGASEQ8NFI3 743 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 PRPF31Q8WWY3 499 aaKnown RBP11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 PSPC1Q8WXF1 523 aaKnown RBP11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 TASP1Q9H6P5 420 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 ZBTB40Q9NUA8 1239 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 GMIPQ9P107 970 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 FBXL5Q9UKA1 691 aa11.27□□□□□ -0.61
AP003900.1-202ENST00000616952 TLN1Q9Y490 2541 aaKnown RBP11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 SGK1O00141 431 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 FGF19O95750 216 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 GABRR2P28476 465 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 GRK6P43250 576 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 BRCC3P46736 316 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 USP11P51784 963 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 SKOR1P84550 965 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 CYP4F8P98187 520 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 LAMTOR4Q0VGL1 99 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 AMHR2Q16671 573 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 HES3Q5TGS1 186 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 CC2D1AQ6P1N0 951 aaPredicted RBP11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 SLC27A1Q6PCB7 646 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 CD300LGQ6UXG3 332 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 TXNDC5Q8NBS9 432 aaKnown RBP11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 ECT2Q9H8V3 914 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 CCL26Q9Y258 94 aa11.26□□□□□ -0.61
AP003900.1-202ENST00000616952 IGHV1OR15-9A0A0B4J2B8 117 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 ESYT2A0FGR8 921 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 ANO9A1A5B4 782 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 H7C4K7 107 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 J3QL48 77 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 CHMP2AO43633 222 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 STBD1O95210 358 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 ARF4P18085 180 aaPredicted RBP11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 TNFRSF8P28908 595 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 CLCNKBP51801 687 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 EPHB3P54753 998 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 NMIQ13287 307 aaPredicted RBP11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 HLA-BQ31612 363 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 SYCP2LQ5T4T6 812 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 IL27RAQ6UWB1 636 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 CDR2LQ86X02 465 aaPredicted RBP11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 IL17RCQ8NAC3 791 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 RIN3Q8TB24 985 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 OTUD7AQ8TE49 926 aaPredicted RBP11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 KCNE4Q8WWG9 221 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 EVI5LQ96CN4 794 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 HIC2Q96JB3 615 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 GPRC5CQ9NQ84 441 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 CALCOCO1Q9P1Z2 691 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 PCDHGC3Q9UN70 934 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 PCDHGA1Q9Y5H4 931 aa11.25□□□□□ -0.61
AP003900.1-202ENST00000616952 A0A1B0GTW7 788 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 hCG_1642624A0A1W2PR95 340 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 KLK10O43240 276 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 PLEKHA8P1O95397 391 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 KLF8O95600 359 aaPredicted RBP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 CPB1P15086 417 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 SFNP31947 248 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 JAK3P52333 1124 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 MRPS21P82921 87 aaKnown RBP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 PTH1RQ03431 593 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 AP3B2Q13367 1082 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 IMMTQ16891 758 aaKnown RBP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 CTXN3Q4LDR2 81 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 WDR45BQ5MNZ6 344 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 PLA2G4FQ68DD2 849 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 TEX2Q8IWB9 1127 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 DHX40Q8IX18 779 aaKnown RBP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 CMTM8Q8IZV2 173 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 ZCCHC9Q8N567 271 aaKnown RBP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 CTCFLQ8NI51 663 aaPredicted RBP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 CXCL16Q9H2A7 254 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 KIF9Q9HAQ2 790 aa11.24□□□□□ -0.61
AP003900.1-202ENST00000616952 RIC8AQ9NPQ8 531 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms