RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 KCNN1Q92952 543 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 SNX27Q96L92 541 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 CCDC114Q96M63 670 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 WNT8AQ9H1J5 351 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 MRPL47Q9HD33 250 aaKnown RBP3.64□□□□□ -1.83
LIG4-205ENST00000614526 CREBZFQ9NS37 354 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 COX16Q9P0S2 106 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 GTF2IRD1Q9UHL9 959 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 TMEM59LQ9UK28 342 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 CNTN6Q9UQ52 1028 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 FAN1Q9Y2M0 1017 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 PCDHA3Q9Y5H8 950 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 TRIP11Q15643 1979 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TARSL2A2RTX5 802 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 CCDC66A2RUB6 948 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 LRRD1A4D1F6 860 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MIF4GDA9UHW6 222 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 F8W810 466 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MAP2K7O14733 419 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TOMM70O94826 608 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 LCP1P13796 627 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CTNNA1P35221 906 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 SCNN1GP51170 649 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 GJA9P57773 515 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TUBB4BP68371 445 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MRPS6P82932 125 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 PLCB3Q01970 1234 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 DCAF4L1Q3SXM0 396 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 FBXO47Q5MNV8 452 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 SYCP2LQ5T4T6 812 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 PLEKHA7Q6IQ23 1121 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 PMF1Q6P1K2 205 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CTU1Q7Z7A3 348 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 PHF13Q86YI8 300 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 CCDC26Q8TAB7 109 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 CLEC4CQ8WTT0 213 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 HNRNPLLQ8WVV9 542 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 RAPGEF5Q92565 580 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 HSPH1Q92598 858 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CD101Q93033 1021 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 PWWP2AQ96N64 755 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 RPS6KC1Q96S38 1066 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 NT5C1AQ9BXI3 368 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 BCO2Q9BYV7 579 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MAGEB5Q9BZ81 275 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 RABEP2Q9H5N1 569 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 GPATCH2LQ9NWQ4 482 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ITGA11Q9UKX5 1188 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 PADI3Q9ULW8 664 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 HPCAL4Q9UM19 191 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 BARX2Q9UMQ3 279 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 UTP11Q9Y3A2 253 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 C2CD2Q9Y426 696 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 SCN1AP35498 2009 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TMEM191CA6NGB0 347 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 SMIM23A6NLE4 172 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 KPNA7A9QM74 516 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 PTGESO14684 152 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MGEA5O60502 916 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ADAMTS4O75173 837 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 KRT14P02533 472 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 KRT1P04264 644 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CD48P09326 243 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 YY1P25490 414 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 GNL1P36915 607 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 GPD2P43304 727 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 YWHAEP62258 255 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 C1QBPQ07021 282 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 ENPEPQ07075 957 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 PDCLQ13371 301 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ITGA7Q13683 1181 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 PPP1R7Q15435 360 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 HSP90B2PQ58FF3 399 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 HP1BP3Q5SSJ5 553 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 UBAP2Q5T6F2 1119 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 WSCD1Q658N2 575 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TTC19Q6DKK2 380 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 MFSD7Q6UXD7 560 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TRIM72Q6ZMU5 477 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ZNF572Q7Z3I7 529 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 MAATS1Q7Z4T9 603 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TTC30AQ86WT1 665 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 JAMLQ86YT9 394 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 NETO2Q8NC67 525 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 AENQ8WTP8 325 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 UBLCP1Q8WVY7 318 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 DDX27Q96GQ7 796 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 SNX25Q9H3E2 840 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 NGRNQ9NPE2 291 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 GDF3Q9NR23 364 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 BCCIPQ9P287 314 aaKnown RBP eCLIP3.63□□□□□ -1.83
LIG4-205ENST00000614526 ATP8A1Q9Y2Q0 1164 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MRPL42Q9Y6G3 142 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 MGAMO43451 1857 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 GOLGA6BA6NDN3 693 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ERICH4A6NGS2 130 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MED7O43513 233 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MTA2O94776 668 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 IFNB1P01574 187 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms