RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 WDR5BQ86VZ2 330 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 FAM160A2Q8N612 972 aaPredicted RBP19.22■□□□□ 0.67
SMN2-213ENST00000614240 USP13Q92995 863 aaPredicted RBP19.22■□□□□ 0.67
SMN2-213ENST00000614240 SAAL1Q96ER3 474 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 CNTNAP3BQ96NU0 1288 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 CNTNAP3Q9BZ76 1288 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 EBF3Q9H4W6 596 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 TDP1Q9NUW8 608 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 TMLHEQ9NVH6 421 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 SLC8A2Q9UPR5 921 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 CLIC4Q9Y696 253 aa19.22■□□□□ 0.67
SMN2-213ENST00000614240 SLC30A4O14863 429 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 EXTL3O43909 919 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 FOXD2O60548 495 aaPredicted RBP19.21■□□□□ 0.67
SMN2-213ENST00000614240 ATG13O75143 517 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 ITGB3P05106 788 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 GPR15P49685 360 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 MYL7Q01449 175 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 KCNA1Q09470 495 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
SMN2-213ENST00000614240 SDHAF4Q5VUM1 108 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 TRIM68Q6AZZ1 485 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 TMEM150AQ86TG1 271 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 CSGALNACT2Q8N6G5 542 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 STKLD1Q8NE28 680 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 TTC16Q8NEE8 873 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 FAM83CQ9BQN1 747 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 KIF9Q9HAQ2 790 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 DDX43Q9NXZ2 648 aaKnown RBP19.21■□□□□ 0.67
SMN2-213ENST00000614240 RBAKQ9NYW8 714 aaPredicted RBP19.21■□□□□ 0.67
SMN2-213ENST00000614240 CCL26Q9Y258 94 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 R3HCC1Q9Y3T6 440 aaKnown RBP19.21■□□□□ 0.67
SMN2-213ENST00000614240 PCDHB13Q9Y5F0 798 aa19.21■□□□□ 0.67
SMN2-213ENST00000614240 MYMKA6NI61 221 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 PPP1R37O75864 691 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 LDHAP00338 332 aaKnown RBP19.2■□□□□ 0.66
SMN2-213ENST00000614240 KRT19P08727 400 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 HMGA1P17096 107 aaKnown RBP19.2■□□□□ 0.66
SMN2-213ENST00000614240 PDCP20941 246 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 KCNA4P22459 653 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 DDR2Q16832 855 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 MON1AQ86VX9 555 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 BRSK2Q8IWQ3 736 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 EXOC4Q96A65 974 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 ACBD6Q9BR61 282 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 TRPC7Q9HCX4 862 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 HPS4Q9NQG7 708 aa19.2■□□□□ 0.66
SMN2-213ENST00000614240 UXTQ9UBK9 157 aaPredicted RBP19.2■□□□□ 0.66
SMN2-213ENST00000614240 FRYLO94915 3013 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 SCN1AP35498 2009 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 GOLGA8IPA6NC78 632 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 GOLGA8JA6NMD2 632 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 SOBPA7XYQ1 873 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 TRDMT1O14717 391 aaKnown RBP19.19■□□□□ 0.66
SMN2-213ENST00000614240 AXIN1O15169 862 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 CCDC192P0DO97 292 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 ACAT1P24752 427 aaKnown RBP19.19■□□□□ 0.66
SMN2-213ENST00000614240 CYP2F1P24903 491 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 HOXC13P31276 330 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 PXNP49023 591 aaPredicted RBP19.19■□□□□ 0.66
SMN2-213ENST00000614240 RBP5P82980 135 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 CEBPZQ03701 1054 aaKnown RBP19.19■□□□□ 0.66
SMN2-213ENST00000614240 PDGFRLQ15198 375 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 TMEM196Q5HYL7 178 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 PPM1JQ5JR12 505 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 FSTL4Q6MZW2 842 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 TMEM86AQ8N2M4 240 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 C1orf127Q8N9H9 656 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 STRA6Q9BX79 667 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 FBXO2Q9UK22 296 aaPredicted RBP19.19■□□□□ 0.66
SMN2-213ENST00000614240 L1RE1Q9UN81 338 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 SRPRBQ9Y5M8 271 aaKnown RBP19.19■□□□□ 0.66
SMN2-213ENST00000614240 SNX9Q9Y5X1 595 aa19.19■□□□□ 0.66
SMN2-213ENST00000614240 TSC2P49815 1807 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 NUP210Q8TEM1 1887 aaPredicted RBP19.18■□□□□ 0.66
SMN2-213ENST00000614240 RPP40O75818 363 aaKnown RBP19.18■□□□□ 0.66
SMN2-213ENST00000614240 ARSAP15289 507 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 GARTP22102 1010 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 STAT6P42226 847 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 WNT7BP56706 349 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 AASDHQ4L235 1098 aaPredicted RBP19.18■□□□□ 0.66
SMN2-213ENST00000614240 INTS6LQ5JSJ4 861 aaKnown RBP19.18■□□□□ 0.66
SMN2-213ENST00000614240 PKN3Q6P5Z2 889 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 CCDC73Q6ZRK6 1079 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 CACNA2D4Q7Z3S7 1137 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 SPATA2LQ8IUW3 424 aaPredicted RBP19.18■□□□□ 0.66
SMN2-213ENST00000614240 SCN4BQ8IWT1 228 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 LRRC52Q8N7C0 313 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 C12orf50Q8NA57 414 aaPredicted RBP19.18■□□□□ 0.66
SMN2-213ENST00000614240 ZSWIM2Q8NEG5 633 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 LEO1Q8WVC0 666 aaPredicted RBP19.18■□□□□ 0.66
SMN2-213ENST00000614240 GAB3Q8WWW8 586 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 DNAJC19Q96DA6 116 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 CLIC6Q96NY7 704 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 PANK2Q9BZ23 570 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 PCIF1Q9H4Z3 704 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 ABCB6Q9NP58 842 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 GTF3C4Q9UKN8 822 aa19.18■□□□□ 0.66
SMN2-213ENST00000614240 ITGA11Q9UKX5 1188 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms