RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CD101Q93033 1021 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 AZIN2Q96A70 460 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 SPATA33Q96N06 139 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 NAALADL1Q9UQQ1 740 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 NPHP3-ACAD11A0A0J9YXS1 232 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 EDF1O60869 148 aaKnown RBP23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 TJP3O95049 919 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 ZWINTO95229 277 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 AKR1A1P14550 325 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 HOXD13P35453 343 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 ARHGAP1Q07960 439 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 GIT2Q14161 759 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 RCN2Q14257 317 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 SPARCL1Q14515 664 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 TRMT1LQ7Z2T5 733 aaKnown RBP23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 PPFIBP2Q8ND30 876 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 C10orf82Q8WW14 230 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 GATA6Q92908 595 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 STK24Q9Y6E0 443 aa23.12■■□□□ 1.29
POLR2J3-220ENST00000613744 NFASCO94856 1347 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 TP73O15350 636 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 THAP12O43422 761 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 ABHD2P08910 425 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 CACNA2D1P54289 1103 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 ACTR2P61160 394 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 GPC5P78333 572 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 PTK6Q13882 451 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 MAP3K21Q5TCX8 1036 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 SNX30Q5VWJ9 437 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 AADACL2Q6P093 401 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 METTL7BQ6UX53 244 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 TPH2Q8IWU9 490 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 OR6J1Q8NGC5 347 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 DYDC2Q96IM9 177 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 PLVAPQ9BX97 442 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 CHCHD3Q9NX63 227 aaKnown RBP23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 GNEQ9Y223 722 aaKnown RBP23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 SH3BP1Q9Y3L3 701 aa23.11■■□□□ 1.29
POLR2J3-220ENST00000613744 C2CD2LO14523 706 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 PENKP01210 267 aaPredicted RBP23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 SPATA31C1P0DKV0 1188 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 CASP5P51878 434 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 WDR4P57081 412 aaKnown RBP23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 SLC34A1Q06495 639 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 B3GNT9Q6UX72 402 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 KLHL23Q8NBE8 558 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 GRK7Q8WTQ7 553 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 GBP5Q96PP8 586 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 AGPAT1Q99943 283 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 FOXP3Q9BZS1 431 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 GPR88Q9GZN0 384 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 PCMTD2Q9NV79 361 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 SENP1Q9P0U3 644 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 SMG5Q9UPR3 1016 aaKnown RBP23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 SEPT4O43236 478 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 CREB3O43889 395 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 ENTPD5O75356 428 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 RPA1P27694 616 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 AP1B1Q10567 949 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 PDK4Q16654 411 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 TLK2Q86UE8 772 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 SRRM1Q8IYB3 904 aaKnown RBP23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 BBOF1Q8ND07 529 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 AFG1LQ8WV93 481 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 UCMAQ8WVF2 138 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 NINJ2Q9NZG7 142 aa23.1■■□□□ 1.29
POLR2J3-220ENST00000613744 H0Y3Z8 333 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 NOP56O00567 594 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 CCDC22O60826 627 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 PSMC2P35998 433 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 KRT76Q01546 638 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 CDR2Q01850 454 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 KRT17Q04695 432 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 FAM47EQ6ZV65 393 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 DENND1AQ8TEH3 1009 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 TRAIPQ9BWF2 469 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 ZNF212Q9UDV6 495 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 PGK1P00558 417 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 PYGMP11217 842 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 COMTP21964 271 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 FMO5P49326 533 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 CACNB1Q02641 598 aaPredicted RBP23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 FOXB2Q5VYV0 432 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 LRRC74BQ6ZQY2 392 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 SFR1Q86XK3 245 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 CYP4X1Q8N118 509 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 SCG3Q8WXD2 468 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 UNC93B1Q9H1C4 597 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 MMADHCQ9H3L0 296 aaPredicted RBP23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 ZHX3Q9H4I2 956 aa23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 DDX43Q9NXZ2 648 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-220ENST00000613744 GSTTP1A0A1W2PQM5 241 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 FSCN2O14926 492 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 HGSO14964 777 aaPredicted RBP23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 SLITRK3O94933 977 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 MARCKSL1P49006 195 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 BEX3Q00994 111 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 ZNF746Q6NUN9 644 aaPredicted RBP23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 FBXO46Q6PJ61 603 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms