RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TUBGCP2Q9BSJ2 902 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 RHOBTB2Q9BYZ6 727 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 DPEP3Q9H4B8 488 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 PIDD1Q9HB75 910 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 CRTAC1Q9NQ79 661 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 PCDHB5Q9Y5E4 795 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 INSL5Q9Y5Q6 135 aa17.74■□□□□ 0.43
IRF1-211ENST00000613424 LRG1P02750 347 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 PRKCSHP14314 528 aaPredicted RBP17.73■□□□□ 0.43
IRF1-211ENST00000613424 PTPN1P18031 435 aaKnown RBP17.73■□□□□ 0.43
IRF1-211ENST00000613424 EEF1GP26641 437 aaKnown RBP17.73■□□□□ 0.43
IRF1-211ENST00000613424 MTHFRP42898 656 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 NDST1P52848 882 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 CBX2Q14781 532 aaPredicted RBP17.73■□□□□ 0.43
IRF1-211ENST00000613424 VWA3BQ502W6 1294 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 TJAP1Q5JTD0 557 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 MIIPQ5JXC2 388 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 TTC9BQ8N6N2 239 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 MYCBPAPQ8TBZ2 947 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 ABI2Q9NYB9 513 aaPredicted RBP17.73■□□□□ 0.43
IRF1-211ENST00000613424 HSFX1Q9UBD0 423 aa17.73■□□□□ 0.43
IRF1-211ENST00000613424 VCANP13611 3396 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 XYLBO75191 536 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 POU2F2P09086 479 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 HAPLN1P10915 354 aaPredicted RBP17.72■□□□□ 0.43
IRF1-211ENST00000613424 CD58P19256 250 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 TUFMP49411 452 aaKnown RBP17.72■□□□□ 0.43
IRF1-211ENST00000613424 ZNF165P49910 485 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 INCA1Q0VD86 236 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 TWF1Q12792 350 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 MDH1BQ5I0G3 518 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 UNC93AQ86WB7 457 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 SPATA2LQ8IUW3 424 aaPredicted RBP17.72■□□□□ 0.43
IRF1-211ENST00000613424 AOPEPQ8N6M6 819 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 B3GALNT2Q8NCR0 500 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 NECTIN4Q96NY8 510 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 NT5C1BQ96P26 610 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 CRACR2AQ9BSW2 395 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 NDST4Q9H3R1 872 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 POMKQ9H5K3 350 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 HMGXB4Q9UGU5 601 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 YIPF1Q9Y548 306 aa17.72■□□□□ 0.43
IRF1-211ENST00000613424 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 SMTNL1A8MU46 457 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 CILPO75339 1184 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 SOAT2O75908 522 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 CYP2F1P24903 491 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 ALDH1A3P47895 512 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 ORC1Q13415 861 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 CUL2Q13617 745 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 MAPRE1Q15691 268 aaKnown RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 MGAT5BQ3V5L5 792 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 C4orf50Q6ZRC1 276 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 GRASPQ7Z6J2 395 aaPredicted RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 ACOT1Q86TX2 421 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 DHX40Q8IX18 779 aaKnown RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 CRYBG2Q8N1P7 616 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 WHAMMQ8TF30 809 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 MYLPFQ96A32 169 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 PCED1BQ96HM7 432 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 TNIP3Q96KP6 325 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 SEPT5Q99719 369 aaPredicted RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 ARID3AQ99856 593 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 INTS2Q9H0H0 1204 aaKnown RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 HSD3B7Q9H2F3 369 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 WDR6Q9NNW5 1121 aaKnown RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 ABCB6Q9NP58 842 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 CISHQ9NSE2 258 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 HCFC1R1Q9NWW0 138 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 CEP72Q9P209 647 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 DNMT3BQ9UBC3 853 aaKnown RBP17.71■□□□□ 0.43
IRF1-211ENST00000613424 C2orf16Q68DN1 1984 aa17.71■□□□□ 0.43
IRF1-211ENST00000613424 GTPBP10A4D1E9 387 aaKnown RBP17.7■□□□□ 0.42
IRF1-211ENST00000613424 ZNF18P17022 549 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 SLC9A1P19634 815 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 CYP27A1Q02318 531 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 PLD1Q13393 1074 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 KRT31Q15323 416 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 CFAP221Q4G0U5 840 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 ELMOD1Q8N336 334 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 FUBP3Q96I24 572 aaKnown RBP eCLIP17.7■□□□□ 0.42
IRF1-211ENST00000613424 ZNF512Q96ME7 567 aaPredicted RBP17.7■□□□□ 0.42
IRF1-211ENST00000613424 TWNKQ96RR1 684 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 PHF7Q9BWX1 381 aaPredicted RBP17.7■□□□□ 0.42
IRF1-211ENST00000613424 NT5C1AQ9BXI3 368 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 VPS16Q9H269 839 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 TAB2Q9NYJ8 693 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 GCNT4Q9P109 453 aa17.7■□□□□ 0.42
IRF1-211ENST00000613424 A0A0C4DFX4 3053 aa17.69■□□□□ 0.42
IRF1-211ENST00000613424 PES1O00541 588 aaKnown RBP17.69■□□□□ 0.42
IRF1-211ENST00000613424 PTPN2P17706 415 aa17.69■□□□□ 0.42
IRF1-211ENST00000613424 CDK11BP21127 795 aaKnown RBP17.69■□□□□ 0.42
IRF1-211ENST00000613424 BDNFP23560 247 aa17.69■□□□□ 0.42
IRF1-211ENST00000613424 TBXAS1P24557 533 aaPredicted RBP17.69■□□□□ 0.42
IRF1-211ENST00000613424 EPHB3P54753 998 aa17.69■□□□□ 0.42
IRF1-211ENST00000613424 NTHL1P78549 312 aa17.69■□□□□ 0.42
IRF1-211ENST00000613424 IQCB1Q15051 598 aa17.69■□□□□ 0.42
IRF1-211ENST00000613424 EXOC3L4Q17RC7 722 aa17.69■□□□□ 0.42
IRF1-211ENST00000613424 ZNF394Q53GI3 561 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms