RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
TSKU-205ENST00000612930 NMD3Q96D46 503 aaKnown RBP17.4■□□□□ 0.38
TSKU-205ENST00000612930 FAM111AQ96PZ2 611 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 SHOC2Q9UQ13 582 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 ITGA2BP08514 1039 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 EEF2P13639 858 aaKnown RBP17.4■□□□□ 0.38
TSKU-205ENST00000612930 GYS1P13807 737 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 FNBP1LQ5T0N5 605 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 C6orf163Q5TEZ5 329 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 RASSF3Q86WH2 238 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 CBWD2Q8IUF1 395 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 TAS1R2Q8TE23 839 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 MPP4Q96JB8 637 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 NT5C1BQ96P26 610 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 ACSS3Q9H6R3 686 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 CLIC5Q9NZA1 410 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 CNTN3Q9P232 1028 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 POLIQ9UNA4 740 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 SMCHD1A6NHR9 2005 aa17.4■□□□□ 0.38
TSKU-205ENST00000612930 ARHGEF35A5YM69 484 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 GPC3P51654 580 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 GPSM2P81274 684 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 KDSRQ06136 332 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 LRRC36Q1X8D7 754 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 KRT39Q6A163 491 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 DRICH1Q6PGQ1 229 aaPredicted RBP17.39■□□□□ 0.37
TSKU-205ENST00000612930 C3orf62Q6ZUJ4 267 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 DCAF4Q8WV16 495 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 MTBPQ96DY7 904 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 SERAC1Q96JX3 654 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 ACCSQ96QU6 501 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 TOPORSQ9NS56 1045 aaPredicted RBP17.39■□□□□ 0.37
TSKU-205ENST00000612930 COQ4Q9Y3A0 265 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 IL1BP01584 269 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 FAM163BP0C2L3 166 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 BPIFB4P59827 614 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 DEUP1Q05D60 604 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 GRAPQ13588 217 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 HIF1AQ16665 826 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 ADGRG6Q86SQ4 1221 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
TSKU-205ENST00000612930 PYROXD1Q8WU10 500 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 FAM172AQ8WUF8 416 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 STRIP2Q9ULQ0 834 aa17.39■□□□□ 0.37
TSKU-205ENST00000612930 ATP9BO43861 1147 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 TCF4P15884 667 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 MED21Q13503 144 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 MON1BQ7L1V2 547 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.372e-9■■■■□ 23.2
TSKU-205ENST00000612930 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.38■□□□□ 0.37
TSKU-205ENST00000612930 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
TSKU-205ENST00000612930 PPARGC1AQ9UBK2 798 aaKnown RBP17.38■□□□□ 0.37
TSKU-205ENST00000612930 TAGLN3Q9UI15 199 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 SPECC1L-ADORA2AF8WAN1 911 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 UQCRBP14927 111 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 PHBP35232 272 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 SH3BGRP55822 239 aaPredicted RBP17.38■□□□□ 0.37
TSKU-205ENST00000612930 MAP7Q14244 749 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 R3HDM1Q15032 1099 aaKnown RBP17.38■□□□□ 0.37
TSKU-205ENST00000612930 OASLQ15646 514 aaKnown RBP17.38■□□□□ 0.37
TSKU-205ENST00000612930 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.38■□□□□ 0.37
TSKU-205ENST00000612930 ANKRD22Q5VYY1 191 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 MFSD7Q6UXD7 560 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 SH2D5Q6ZV89 423 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 ATP11CQ8NB49 1132 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 HAUS1Q96CS2 278 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 LXNQ9BS40 222 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 UNC45AQ9H3U1 944 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 S100A14Q9HCY8 104 aa17.38■□□□□ 0.37
TSKU-205ENST00000612930 FARP1Q9Y4F1 1045 aaPredicted RBP17.38■□□□□ 0.37
TSKU-205ENST00000612930 ZNF536O15090 1300 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 FKBP6O75344 327 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 MT-ND3P03897 115 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 ATF7P17544 494 aaPredicted RBP17.37■□□□□ 0.37
TSKU-205ENST00000612930 MAGEA8P43361 318 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 MTM1Q13496 603 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 KLHL38Q2WGJ6 581 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 LPCAT4Q643R3 524 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 PADI6Q6TGC4 694 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 DHDDSQ86SQ9 333 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 GSTCDQ8NEC7 633 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 DNAJC1Q96KC8 554 aaKnown RBP17.37■□□□□ 0.37
TSKU-205ENST00000612930 SLITRK1Q96PX8 696 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 TMEM121Q9BTD3 319 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 KCNK4Q9NYG8 393 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 DRG1Q9Y295 367 aaKnown RBP17.37■□□□□ 0.37
TSKU-205ENST00000612930 SMIM31A0A1B0GVY4 71 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 GAS7O60861 476 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 UFL1O94874 794 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 IFNB1P01574 187 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 DLG1Q12959 904 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 MAMLD1Q13495 774 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 DNAL1Q4LDG9 190 aa17.37■□□□□ 0.37
TSKU-205ENST00000612930 KYAT3Q6YP21 454 aaKnown RBP17.37■□□□□ 0.37
TSKU-205ENST00000612930 PYDC1Q8WXC3 89 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms