RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 MAPK4P31152 587 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 MMP13P45452 471 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 TUFMP49411 452 aaKnown RBP11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 SLMAPQ14BN4 828 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 SCARA3Q6AZY7 606 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 LILRB1Q8NHL6 650 aaPredicted RBP11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 BSNDQ8WZ55 320 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM213AQ9BRX8 229 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 OCEL1Q9H607 264 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 DKK3Q9UBP4 350 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 STK38LQ9Y2H1 464 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 L3MBTL1Q9Y468 752 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 LOXHD1Q8IVV2 1947 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 EIF4E1BA6NMX2 242 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 ASNSP08243 561 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 CNGA1P29973 690 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 QARSP47897 775 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 FKBP1CQ5VVH2 108 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 SRRM1Q8IYB3 904 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 CYP4X1Q8N118 509 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 NDUFAF2Q8N183 169 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 ATP6V0A1Q93050 837 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 OPTNQ96CV9 577 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 EBF2Q9HAK2 575 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 HTR3EA5X5Y0 456 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 CCT8L1PA6NM43 557 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 A8MUI8 341 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 MIF4GDA9UHW6 222 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 HNRNPDLO14979 420 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 NUDT17P0C025 328 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 CTNNA2P26232 953 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 CDC25CP30307 473 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 ADCY8P40145 1251 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 MLH1P40692 756 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 ITGA8P53708 1063 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 SIX1Q15475 284 aaPredicted RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 ATP13A4Q4VNC1 1196 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 C11orf63Q6NUN7 778 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 CTU1Q7Z7A3 348 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 FAM83AQ86UY5 434 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 C11orf74Q86VG3 221 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 OSTM1Q86WC4 334 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 TMEM151BQ8IW70 566 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 KIAA1958Q8N8K9 716 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 MAIP1Q8WWC4 291 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 PRCCQ92733 491 aaPredicted RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 C11orf70Q9BRQ4 267 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 CNOT10Q9H9A5 744 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 AAASQ9NRG9 546 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 PCDHA3Q9Y5H8 950 aa11.27□□□□□ -0.61
PCDHGC3-202ENST00000611950 WNT10BO00744 389 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 THAP12O43422 761 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 MGEA5O60502 916 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 UBOX5O94941 541 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 CCNE2O96020 404 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 CCDC166P0CW27 439 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 CETPP11597 493 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 ACOT2P49753 483 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 WNT7BP56706 349 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 KCNJ2P63252 427 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 GTF2BQ00403 316 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 MPP2Q14168 576 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 INAQ16352 499 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 PCNX4Q63HM2 1172 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 C12orf56Q8IXR9 622 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 FAM71AQ8IYT1 594 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 WNK4Q96J92 1243 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 IER2Q9BTL4 223 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 C5orf60A6NFR6 353 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 SPAG7O75391 227 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 PAEPP09466 180 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 RFX1P22670 979 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 NPTX2P47972 431 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 MFAP3P55082 362 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 RPS6P62753 249 aaKnown RBP11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 MAP3K10Q02779 954 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 CNGA2Q16280 664 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZNF362Q5T0B9 420 aaPredicted RBP11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 NIPA1Q7RTP0 329 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 TEKT4Q8WW24 435 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 CD101Q93033 1021 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZBED3Q96IU2 234 aaPredicted RBP11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 SCYL1Q96KG9 808 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 NT5C1BQ96P26 610 aa11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
PCDHGC3-202ENST00000611950 ZFATQ9P243 1243 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms