RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CMTM8Q8IZV2 173 aa14.39□□□□□ -0.11
HMGB1P24-201ENST00000611897 MRPS31Q92665 395 aaKnown RBP14.39□□□□□ -0.11
HMGB1P24-201ENST00000611897 TMLHEQ9NVH6 421 aa14.39□□□□□ -0.11
HMGB1P24-201ENST00000611897 HSFX1Q9UBD0 423 aa14.39□□□□□ -0.11
HMGB1P24-201ENST00000611897 AGAP1Q9UPQ3 857 aa14.39□□□□□ -0.11
HMGB1P24-201ENST00000611897 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.39□□□□□ -0.11
HMGB1P24-201ENST00000611897 AXIN1O15169 862 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 IL18RAPO95256 599 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 CCDC192P0DO97 292 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 TXLNAP40222 546 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 WNT7BP56706 349 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 NLRP12P59046 1061 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 KCNA1Q09470 495 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 GRSF1Q12849 480 aaKnown RBP eCLIP14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 RUNX3Q13761 415 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 PTPAQ15257 358 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 DDR2Q16832 855 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 CCDC142Q17RM4 750 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 AASDHQ4L235 1098 aaPredicted RBP14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 SYCP3Q8IZU3 236 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 ZSWIM2Q8NEG5 633 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 C2orf15Q8WU43 125 aaKnown RBP14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 KCNN1Q92952 543 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 USP13Q92995 863 aaPredicted RBP14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 HPS4Q9NQG7 708 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 POLR3BQ9NW08 1133 aaPredicted RBP14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 RBAKQ9NYW8 714 aaPredicted RBP14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 CCDC39Q9UFE4 941 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 SLC8A2Q9UPR5 921 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 CLIC4Q9Y696 253 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 GREB1Q4ZG55 1949 aa14.38□□□□□ -0.11
HMGB1P24-201ENST00000611897 SLC30A4O14863 429 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 HUS1O60921 280 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 LRP3O75074 770 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 RNF40O75150 1001 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 CNR2P34972 360 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 SMARCB1Q12824 385 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 PSMD2Q13200 908 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 POSTNQ15063 836 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 SF3A2Q15428 464 aaKnown RBP14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 FSTL4Q6MZW2 842 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 CRELD2Q6UXH1 353 aaPredicted RBP14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 ZNF720Q7Z2F6 126 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 TMEM150AQ86TG1 271 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 WDR5BQ86VZ2 330 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 SCN4BQ8IWT1 228 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 PDCL2Q8N4E4 241 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 C12orf50Q8NA57 414 aaPredicted RBP14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 ACCSQ96QU6 501 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 HHIPQ96QV1 700 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 CCSER1Q9C0I3 900 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 ARRDC1-AS1Q9H2J1 176 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 PCIF1Q9H4Z3 704 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 DDX43Q9NXZ2 648 aaKnown RBP14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 STK17AQ9UEE5 414 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 L1RE1Q9UN81 338 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 EXOC7Q9UPT5 735 aa14.37□□□□□ -0.11
HMGB1P24-201ENST00000611897 EML5Q05BV3 1969 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 OTOL1A6NHN0 477 aaPredicted RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 MYMKA6NI61 221 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 HCRTO43612 131 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 RPP40O75818 363 aaKnown RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 PAPSS2O95340 614 aaPredicted RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 EGFP01133 1207 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 CKMP06732 381 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 CSH1P0DML2 217 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 CSH2P0DML3 217 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 HMGA1P17096 107 aaKnown RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 CYP2F1P24903 491 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 ADSSP30520 456 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 PNPLA4P41247 253 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 CASP5P51878 434 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 MYL7Q01449 175 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 CSRP2Q16527 193 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 NFE2Q16621 373 aaPredicted RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 RRAGBQ5VZM2 374 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 LMBRD2Q68DH5 695 aaPredicted RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 NAIF1Q69YI7 327 aaPredicted RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 IL31Q6EBC2 164 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 FAM173BQ6P4H8 233 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 BRSK2Q8IWQ3 736 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 C1orf127Q8N9H9 656 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 RIN3Q8TB24 985 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 HVCN1Q96D96 273 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 CLIC6Q96NY7 704 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 ST6GALNAC4Q9H4F1 302 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 SMOC1Q9H4F8 434 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 KIF9Q9HAQ2 790 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 TDP1Q9NUW8 608 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 R3HCC1Q9Y3T6 440 aaKnown RBP14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 STYXL1Q9Y6J8 313 aa14.36□□□□□ -0.11
HMGB1P24-201ENST00000611897 PPP1R37O75864 691 aa14.35□□□□□ -0.11
HMGB1P24-201ENST00000611897 F11P03951 625 aa14.35□□□□□ -0.11
HMGB1P24-201ENST00000611897 ADRB1P08588 477 aa14.35□□□□□ -0.11
HMGB1P24-201ENST00000611897 TMEM191BP0C7N4 346 aa14.35□□□□□ -0.11
HMGB1P24-201ENST00000611897 GAP43P17677 238 aa14.35□□□□□ -0.11
HMGB1P24-201ENST00000611897 DDX6P26196 483 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGB1P24-201ENST00000611897 STAT6P42226 847 aa14.35□□□□□ -0.11
HMGB1P24-201ENST00000611897 IFNAR2P48551 515 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms