RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
FDPS-220ENST00000611010 ASCC3Q8N3C0 2202 aaKnown RBP12.77□□□□□ -0.37
FDPS-220ENST00000611010 ADAMTS9Q9P2N4 1935 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 PIRO00625 290 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 DPYSL4O14531 572 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 TRDMT1O14717 391 aaKnown RBP12.76□□□□□ -0.37
FDPS-220ENST00000611010 FOXD2O60548 495 aaPredicted RBP12.76□□□□□ -0.37
FDPS-220ENST00000611010 TOP3BO95985 862 aaKnown RBP12.76□□□□□ -0.37
FDPS-220ENST00000611010 PIGRP01833 764 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 F11P03951 625 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 ODC1P11926 461 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
FDPS-220ENST00000611010 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 RUNX3Q13761 415 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 CCDC142Q17RM4 750 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 TMEM119Q4V9L6 283 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 SCARA3Q6AZY7 606 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 PSAPL1Q6NUJ1 521 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 CMTM8Q8IZV2 173 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 SYT2Q8N9I0 419 aaPredicted RBP12.76□□□□□ -0.37
FDPS-220ENST00000611010 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 PLIN2Q99541 437 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 TIPINQ9BVW5 301 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 IKZF4Q9H2S9 585 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 CPSF3Q9UKF6 684 aaKnown RBP12.76□□□□□ -0.37
FDPS-220ENST00000611010 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 ATRXP46100 2492 aa12.76□□□□□ -0.37
FDPS-220ENST00000611010 H3BQV1 296 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 LAMA5O15230 3695 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 OGTO15294 1046 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 AKAP3O75969 853 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 PROS1P07225 676 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 CCDC192P0DO97 292 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 SPINK2P20155 84 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 CDC25CP30307 473 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 PRPHP41219 470 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 WNT7BP56706 349 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 NLRP12P59046 1061 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 FOXD4L6Q3SYB3 417 aaPredicted RBP12.75□□□□□ -0.37
FDPS-220ENST00000611010 MGAT5BQ3V5L5 792 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 KRT79Q5XKE5 535 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 FOXD4L3Q6VB84 417 aaPredicted RBP12.75□□□□□ -0.37
FDPS-220ENST00000611010 HAUS6Q7Z4H7 955 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 REEP2Q9BRK0 252 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 EDEM2Q9BV94 578 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 MYOFQ9NZM1 2061 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 TBX20Q9UMR3 447 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 PCDHGA5Q9Y5G8 931 aa12.75□□□□□ -0.37
FDPS-220ENST00000611010 A0A0B4J269 797 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 LNP1A1A4G5 178 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 HNRNPDLO14979 420 aaKnown RBP12.74□□□□□ -0.37
FDPS-220ENST00000611010 FGF19O95750 216 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 HAPLN1P10915 354 aaPredicted RBP12.74□□□□□ -0.37
FDPS-220ENST00000611010 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
FDPS-220ENST00000611010 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
FDPS-220ENST00000611010 ATP2C1P98194 919 aaPredicted RBP12.74□□□□□ -0.37
FDPS-220ENST00000611010 ZRSR1Q15695 479 aaKnown RBP12.74□□□□□ -0.37
FDPS-220ENST00000611010 SDHAF4Q5VUM1 108 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
FDPS-220ENST00000611010 ITIH5Q86UX2 942 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 EFCAB13Q8IY85 973 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 BICD1Q96G01 975 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 FAM84AQ96KN4 292 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
FDPS-220ENST00000611010 PCDH15Q96QU1 1955 aa12.74□□□□□ -0.37
FDPS-220ENST00000611010 PI4KAP42356 2102 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 PATE3B3GLJ2 98 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 ANKRD63C9JTQ0 380 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 GJA4P35212 333 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 LIG4P49917 911 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 GALK1P51570 392 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 ZNF131P52739 623 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 USP4Q13107 963 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 ZNF77Q15935 545 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 WSCD1Q658N2 575 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 RNF43Q68DV7 783 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 UNQ6494/PRO21346Q6UXR6 183 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 RPLP0P6Q8NHW5 317 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 RPF1Q9H9Y2 349 aaKnown RBP12.73□□□□□ -0.37
FDPS-220ENST00000611010 VPS45Q9NRW7 570 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 ABI2Q9NYB9 513 aaPredicted RBP12.73□□□□□ -0.37
FDPS-220ENST00000611010 ZMIZ1Q9ULJ6 1067 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 SLC8A2Q9UPR5 921 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 DMXL2Q8TDJ6 3036 aa12.73□□□□□ -0.37
FDPS-220ENST00000611010 FREM2Q5SZK8 3169 aa12.72□□□□□ -0.37
FDPS-220ENST00000611010 BCLAF3A2AJT9 711 aaKnown RBP12.72□□□□□ -0.37
FDPS-220ENST00000611010 C4orf47A7E2U8 309 aa12.72□□□□□ -0.37
FDPS-220ENST00000611010 K7ENM7 598 aa12.72□□□□□ -0.37
FDPS-220ENST00000611010 LAD1O00515 517 aa12.72□□□□□ -0.37
FDPS-220ENST00000611010 HCRTO43612 131 aa12.72□□□□□ -0.37
FDPS-220ENST00000611010 BCKDHBP21953 392 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms