RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CAMK1DQ8IU85 385 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 NUDCD3Q8IVD9 361 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CD302Q8IX05 232 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 MAGEB6Q8N7X4 407 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 SLC17A8Q8NDX2 589 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 NXPE3Q969Y0 559 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TRIM43Q96BQ3 446 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 FAR2Q96K12 515 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PHACTR3Q96KR7 559 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PSD2Q9BQI7 771 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TDRD1Q9BXT4 1180 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 GHITMQ9H3K2 345 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 LGR6Q9HBX8 967 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TRIM39Q9HCM9 518 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 DIABLOQ9NR28 239 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 DBF4Q9UBU7 674 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ASIC3Q9UHC3 531 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 AGO2Q9UKV8 859 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PCDHGA10Q9Y5H3 936 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 SNX14Q9Y5W7 946 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 C5P01031 1676 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 RREB1Q92766 1687 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TSPAN4O14817 238 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 POLR1CO15160 346 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 POLR2DO15514 142 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 AKAP10O43572 662 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TRAPPC3O43617 180 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 NOS1APO75052 506 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TRMUO75648 421 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 RHOBTB1O94844 696 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 POP4O95707 220 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CD4P01730 458 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 POLR3DP05423 398 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 P4HBP07237 508 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 SLC3A2P08195 630 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 KRT19P08727 400 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 GSTM1P09488 218 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CKBP12277 381 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 STMN1P16949 149 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TXKP42681 527 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ARHGDIAP52565 204 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 C21orf59P57076 290 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 NUP107P57740 925 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ITIH4Q14624 930 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 MVPQ14764 893 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 VPS72Q15906 364 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ZC2HC1CQ53FD0 456 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 FSCBQ5H9T9 825 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 C1orf146Q5VVC0 180 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TMTC3Q6ZXV5 915 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 EPM2AIP1Q7L775 607 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 AFAP1L2Q8N4X5 818 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ANKRD44Q8N8A2 993 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 METTL6Q8TCB7 284 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CPLX3Q8WVH0 158 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TAMM41Q96BW9 452 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 REXO5Q96IC2 774 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ZC3H10Q96K80 434 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 XPO6Q96QU8 1125 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CITED4Q96RK1 184 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 SETDB2Q96T68 719 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 GAS2L1Q99501 681 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ELAC2Q9BQ52 826 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TRIM62Q9BVG3 475 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 SMYD3Q9H7B4 428 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CAPN10Q9HC96 672 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 SYBUQ9NX95 663 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 EHD3Q9NZN3 535 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PI4KBQ9UBF8 816 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 TNFRSF10DQ9UBN6 386 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 GMEB2Q9UKD1 530 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PNMA3Q9UL41 463 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 RPH3AQ9Y2J0 694 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 NR2E3Q9Y5X4 410 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 A0A088AWK7 358 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.94□□□□□ -1.62
HDDC2-208ENST00000609021 WNT7AO00755 349 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 SHOXO15266 292 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 CLOCKO15516 846 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 ADAMTS4O75173 837 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 HAUS5O94927 633 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 ALX3O95076 343 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 MYCLP12524 364 aaPredicted RBP4.94□□□□□ -1.62
HDDC2-208ENST00000609021 GAP43P17677 238 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 TBXAS1P24557 533 aaPredicted RBP4.94□□□□□ -1.62
HDDC2-208ENST00000609021 LMOD1P29536 600 aaPredicted RBP4.94□□□□□ -1.62
HDDC2-208ENST00000609021 ETV5P41161 510 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 CAPZA2P47755 286 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 PTPN5P54829 565 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 RESTQ13127 1097 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 MED21Q13503 144 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 NCF4Q15080 339 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 TMEM95Q3KNT9 176 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 FUT11Q495W5 492 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 C5orf22Q49AR2 442 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 C6orf118Q5T5N4 469 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 PPP1R26Q5T8A7 1209 aaPredicted RBP4.94□□□□□ -1.62
HDDC2-208ENST00000609021 HMBOX1Q6NT76 420 aa4.94□□□□□ -1.62
HDDC2-208ENST00000609021 STOX1Q6ZVD7 989 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms