RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ATF7P17544 494 aaPredicted RBP23.5■■□□□ 1.35
SHANK2-220ENST00000608988 PIK3CAP42336 1068 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 RAP1GDS1P52306 607 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 PIGHQ14442 188 aaPredicted RBP23.5■■□□□ 1.35
SHANK2-220ENST00000608988 DAB2IPQ5VWQ8 1189 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 RFWD3Q6PCD5 774 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 SESTD1Q86VW0 696 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 NIPA2Q8N8Q9 360 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 ZNF516Q92618 1163 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 KCNN1Q92952 543 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 DBNDD1Q9H9R9 158 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 ANGPTL2Q9UKU9 493 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 CCPG1Q9ULG6 757 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 ZBTB21Q9ULJ3 1066 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 PCDHB4Q9Y5E5 795 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 IQANK1A0A1B0GTG1 560 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 SPDYE5A6NIY4 337 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 KLF11O14901 512 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 HNRNPDLO14979 420 aaKnown RBP23.49■■□□□ 1.35
SHANK2-220ENST00000608988 GNAT1P11488 350 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 MMP8P22894 467 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 PTGER2P43116 358 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 CDK18Q07002 472 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 KPNB1Q14974 876 aaKnown RBP23.49■■□□□ 1.35
SHANK2-220ENST00000608988 DLGAP5Q15398 846 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 KAZNQ674X7 775 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 DCAKDQ8WVC6 231 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 SCG3Q8WXD2 468 aaKnown RBP23.49■■□□□ 1.35
SHANK2-220ENST00000608988 NGLY1Q96IV0 654 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 NR1H4Q96RI1 486 aaPredicted RBP23.49■■□□□ 1.35
SHANK2-220ENST00000608988 FNBP1Q96RU3 617 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 FAM213AQ9BRX8 229 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 PDP2Q9P2J9 529 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.49■■□□□ 1.35
SHANK2-220ENST00000608988 SGK1O00141 431 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 MAP3K7O43318 606 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 MAGEC1O60732 1142 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 ZBTB16Q05516 673 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 WDR72Q3MJ13 1102 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 ACSBG2Q5FVE4 666 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 DSTYKQ6XUX3 929 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 POLNQ7Z5Q5 900 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 TRIM42Q8IWZ5 723 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 MCPH1Q8NEM0 835 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 IL31RAQ8NI17 732 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 ZBTB10Q96DT7 871 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 TDRD3Q9H7E2 651 aaKnown RBP23.49■■□□□ 1.35
SHANK2-220ENST00000608988 DLGAP2Q9P1A6 1054 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 DCTN4Q9UJW0 460 aa23.49■■□□□ 1.35
SHANK2-220ENST00000608988 CFAP69A5D8W1 941 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 PI4K2BG5E9Z4 385 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 FAM155BO75949 473 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 ESRRAP11474 423 aaPredicted RBP23.48■■□□□ 1.35
SHANK2-220ENST00000608988 ETS1P14921 441 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 CDKN2BP42772 138 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 NEK3P51956 506 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 CBLBQ13191 982 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 SLC27A3Q5K4L6 730 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 THEMIS2Q5TEJ8 643 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 NAT8LQ8N9F0 302 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 APOPT1Q96IL0 206 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 DDX43Q9NXZ2 648 aaKnown RBP23.48■■□□□ 1.35
SHANK2-220ENST00000608988 COL20A1Q9P218 1284 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 WDR35Q9P2L0 1181 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 DNAJB4Q9UDY4 337 aa23.48■■□□□ 1.35
SHANK2-220ENST00000608988 CAPN9O14815 690 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 MT-ND3P03897 115 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 RARBP10826 455 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 HMGB2P26583 209 aaKnown RBP23.47■■□□□ 1.35
SHANK2-220ENST00000608988 TUBP50607 506 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 NOP14P78316 857 aaKnown RBP23.47■■□□□ 1.35
SHANK2-220ENST00000608988 MRPS9P82933 396 aaKnown RBP23.47■■□□□ 1.35
SHANK2-220ENST00000608988 SLC18A2Q05940 514 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 TFDP1Q14186 410 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 RCN2Q14257 317 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 PRKD1Q15139 912 aaPredicted RBP23.47■■□□□ 1.35
SHANK2-220ENST00000608988 ZFYVE27Q5T4F4 411 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 CYTH2Q99418 400 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 TMEM120AQ9BXJ8 343 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 ETAA1Q9NY74 926 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 STYXL1Q9Y6J8 313 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 IVNS1ABPQ9Y6Y0 642 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 A0A0G2JND7 137 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 ATP9AO75110 1047 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 SPAG6O75602 509 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 KRT36O76013 467 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 C2CD6Q53TS8 623 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 TDRD10Q5VZ19 366 aaKnown RBP23.47■■□□□ 1.35
SHANK2-220ENST00000608988 PLA2G4FQ68DD2 849 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 MTHFD1LQ6UB35 978 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 C3orf62Q6ZUJ4 267 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 CLEC4DQ8WXI8 215 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 BSNDQ8WZ55 320 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 KIFC3Q9BVG8 833 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 ZNF518BQ9C0D4 1074 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 KCNK13Q9HB14 408 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 TMOD2Q9NZR1 351 aa23.47■■□□□ 1.35
SHANK2-220ENST00000608988 TCRBV5S1A1TA0A578 114 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 DLDP09622 509 aaKnown RBP23.46■■□□□ 1.35
SHANK2-220ENST00000608988 HP1BP3Q5SSJ5 553 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms