RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 UBE3CQ15386 1083 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 TWISTNBQ3B726 338 aaPredicted RBP4.83□□□□□ -1.64
LINC00343-210ENST00000608220 ATP13A4Q4VNC1 1196 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 TIGD2Q4W5G0 525 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 CCDC178Q5BJE1 867 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 MFSD14BQ5SR56 506 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 LY6G5CQ5SRR4 150 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 KCNV1Q6PIU1 500 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 VRK3Q8IV63 474 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC00343-210ENST00000608220 SLC5A5Q92911 643 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 USP7Q93009 1102 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 TEKT1Q969V4 418 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 CLMNQ96JQ2 1002 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 AGAP2Q99490 1192 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 MXD3Q9BW11 206 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 CPEB1Q9BZB8 566 aaKnown RBP4.83□□□□□ -1.64
LINC00343-210ENST00000608220 EMC7Q9NPA0 242 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 CNNM1Q9NRU3 951 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 EVLQ9UI08 416 aaPredicted RBP4.83□□□□□ -1.64
LINC00343-210ENST00000608220 PRSS50Q9UI38 385 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 FZD1Q9UP38 647 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 CENPFP49454 3210 aa4.83□□□□□ -1.64
LINC00343-210ENST00000608220 MROH5Q6ZUA9 1318 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 DOCK2Q92608 1830 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 A0A1W2PR48 441 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 PRR5-ARHGAP8B1AHC4 643 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 TRIM24O15164 1050 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 ITGB1P05556 798 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 LTA4HP09960 611 aaKnown RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 APOBEC3AP31941 199 aaPredicted RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 APBA1Q02410 837 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 PPATQ06203 517 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 VGLL4Q14135 290 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 CAVIN4Q5BKX8 364 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 LDHAL6AQ6ZMR3 332 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 KIAA0907Q7Z7F0 614 aaPredicted RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 CERS5Q8N5B7 392 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 C8orf58Q8NAV2 365 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 OR52N2Q8NGI0 321 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 OR14C36Q8NHC7 312 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 RSAD2Q8WXG1 361 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 BRI3BPQ8WY22 251 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 LENG9Q96B70 501 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 PARK7Q99497 189 aaKnown RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 PDCD2LQ9BRP1 358 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 NDC1Q9BTX1 674 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 MLST8Q9BVC4 326 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 LSM14BQ9BX40 385 aaKnown RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 WNT8AQ9H1J5 351 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 KCNH6Q9H252 994 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 R3HDMLQ9H3Y0 253 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 ZNF768Q9H5H4 540 aaKnown RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 PRKRIP1Q9H875 184 aaPredicted RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 TRPM5Q9NZQ8 1165 aa4.82□□□□□ -1.64
LINC00343-210ENST00000608220 ZNF70Q9UC06 446 aaPredicted RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 KIAA0100Q14667 2235 aaKnown RBP4.82□□□□□ -1.64
LINC00343-210ENST00000608220 BRCA2P51587 3418 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 ADGRA2Q96PE1 1338 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 ANKRD62A6NC57 917 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 GSG1L2A8MUP6 293 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 GRM8O00222 908 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 PPFIA4O75335 1185 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 FRAT2O75474 233 aaPredicted RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 ALDH1L1O75891 902 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 LPLP06858 475 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 LAG3P18627 525 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 EN2P19622 333 aaPredicted RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 NR4A1P22736 598 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 KLRK1P26718 216 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 PTTG1IPP53801 180 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 LGALS4P56470 323 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 NANOS3P60323 173 aaKnown RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 TRIM25Q14258 630 aaKnown RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 CT83Q5H943 113 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 MBNL2Q5VZF2 373 aaKnown RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 Q6ZPA2 131 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 ANKRD23Q86SG2 305 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 RASSF3Q86WH2 238 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 TDRD7Q8NHU6 1098 aaKnown RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 RAET1EQ8TD07 263 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 PRMT6Q96LA8 375 aaPredicted RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 KCTD10Q9H3F6 313 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 PRDM12Q9H4Q4 367 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 C9orf78Q9NZ63 289 aaPredicted RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 TMPRSS11EQ9UL52 423 aa4.81□□□□□ -1.64
LINC00343-210ENST00000608220 SCAF8Q9UPN6 1271 aaKnown RBP4.81□□□□□ -1.64
LINC00343-210ENST00000608220 FANCIQ9NVI1 1328 aa4.8□□□□□ -1.64
LINC00343-210ENST00000608220 TCP10L2B9ZVM9 353 aa4.8□□□□□ -1.64
LINC00343-210ENST00000608220 TAF5LO75529 589 aa4.8□□□□□ -1.64
LINC00343-210ENST00000608220 GJB1P08034 283 aa4.8□□□□□ -1.64
LINC00343-210ENST00000608220 IFIT1P09914 478 aaKnown RBP4.8□□□□□ -1.64
LINC00343-210ENST00000608220 ZEB1P37275 1124 aaPredicted RBP4.8□□□□□ -1.64
LINC00343-210ENST00000608220 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
LINC00343-210ENST00000608220 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
LINC00343-210ENST00000608220 PLEKHG4Q58EX7 1191 aa4.8□□□□□ -1.64
LINC00343-210ENST00000608220 PITRM1Q5JRX3 1037 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms